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Report for CCDS78098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78098.1 Public Homo sapiens 5 DOK3 24 110 108 CCDS HistoryNCBI Gene:79930Re-query CCDS DB by CCDS ID:78098.1Re-query CCDS DB by GeneID:79930See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357198.9 ENSP00000349727.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357198.9Link to Ensembl Protein Viewer:ENSP00000349727.5Re-query CCDS DB by Nucleotide ID:ENST00000357198Re-query CCDS DB by Protein ID:ENSP00000349727
Original member Current member EBI ENST00000501403.6 ENSP00000421688.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000501403.6Link to Ensembl Protein Viewer:ENSP00000421688.1Re-query CCDS DB by Nucleotide ID:ENST00000501403Re-query CCDS DB by Protein ID:ENSP00000421688
Original member Current member EBI ENST00000510898.7 ENSP00000424726.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000510898.7Link to Ensembl Protein Viewer:ENSP00000424726.2Re-query CCDS DB by Nucleotide ID:ENST00000510898Re-query CCDS DB by Protein ID:ENSP00000424726
Original member Current member NCBI NM_001308235.3 NP_001295164.1 Accepted alive Link to Nucleotide Sequence:NM_001308235.3Link to Protein Sequence:NP_001295164.1Re-query CCDS DB by Nucleotide ID:NM_001308235Re-query CCDS DB by Protein ID:NP_001295164Link to BLAST:NP_001295164.1
Original member Current member NCBI NM_001308236.3 NP_001295165.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001308236.3Link to Protein Sequence:NP_001295165.1Re-query CCDS DB by Nucleotide ID:NM_001308236Re-query CCDS DB by Protein ID:NP_001295165Link to BLAST:NP_001295165.1
Original member Current member NCBI NM_001375794.1 NP_001362723.1 Accepted alive Link to Nucleotide Sequence:NM_001375794.1Link to Protein Sequence:NP_001362723.1Re-query CCDS DB by Nucleotide ID:NM_001375794Re-query CCDS DB by Protein ID:NP_001362723Link to BLAST:NP_001362723.1
Original member Current member NCBI NM_001375795.1 NP_001362724.1 Accepted alive Link to Nucleotide Sequence:NM_001375795.1Link to Protein Sequence:NP_001362724.1Re-query CCDS DB by Nucleotide ID:NM_001375795Re-query CCDS DB by Protein ID:NP_001362724Link to BLAST:NP_001362724.1
Original member Current member NCBI NM_001375796.1 NP_001362725.1 Accepted alive Link to Nucleotide Sequence:NM_001375796.1Link to Protein Sequence:NP_001362725.1Re-query CCDS DB by Nucleotide ID:NM_001375796Re-query CCDS DB by Protein ID:NP_001362725Link to BLAST:NP_001362725.1
Original member Current member NCBI NM_001375797.2 NP_001362726.1 Accepted alive Link to Nucleotide Sequence:NM_001375797.2Link to Protein Sequence:NP_001362726.1Re-query CCDS DB by Nucleotide ID:NM_001375797Re-query CCDS DB by Protein ID:NP_001362726Link to BLAST:NP_001362726.1
Original member Current member NCBI NM_001384137.1 NP_001371066.1 Accepted alive Link to Nucleotide Sequence:NM_001384137.1Link to Protein Sequence:NP_001371066.1Re-query CCDS DB by Nucleotide ID:NM_001384137Re-query CCDS DB by Protein ID:NP_001371066Link to BLAST:NP_001371066.1
Original member Current member NCBI NM_024872.4 NP_079148.3 Accepted alive Link to Nucleotide Sequence:NM_024872.4Link to Protein Sequence:NP_079148.3Re-query CCDS DB by Nucleotide ID:NM_024872Re-query CCDS DB by Protein ID:NP_079148Link to BLAST:NP_079148.3

Chromosomal Locations for CCDS 78098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 177503983 177504660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177504743 177504915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177505011 177505110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177508237 177508542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177509475 177509540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1323 nt):
ATGGACCCTCTGGAGACCCCTATCAAGGATGGCATCCTCTACCAGCAGCATGTCAAGTTTGGCAAGAAGT
GCTGGCGGAAGGTGTGGGCTCTGCTGTATGCAGGAGGCCCATCAGGCGTGGCACGGCTGGAGAGCTGGGA
GGTCCGGGATGGTGGCCTGGGAGCAGCGGGTGACAGGTCGGCAGGGCCTGGCCGGCGAGGGGAGCGACGG
GTCATCCGCCTGGCTGACTGTGTGTCCGTGCTGCCGGCTGACGGCGAGAGCTGCCCCCGGGACACCGGTG
CCTTCCTGCTCACCACCACCGAGCGAAGCCATCTACTGGCTGCTCAGCACCGCCAGGCCTGGATGGGCCC
CATCTGCCAGCTGGCCTTCCCGGGGACAGGGGAGGCCTCCTCAGGATCCACAGATGCCCAGTCTCCCAAG
AGGGGCCTGGTCCCCATGGAGGAAAACTCCATCTACTCCTCCTGGCAGGAAGTGGGCGAGTTTCCCGTGG
TGGTGCAGAGGACTGAGGCCGCCACCCGCTGCCAGCTGAAGGGGCCGGCCCTGCTGGTGCTGGGCCCAGA
CGCCATCCAGCTGAGGGAGGCCAAGGGCACCCAGGCCCTCTACAGCTGGCCCTACCACTTCCTGCGCAAG
TTCGGCTCCGACAAGGGCGTGTTCTCCTTTGAGGCCGGCCGTCGCTGCCACTCGGGTGAGGGCCTCTTTG
CCTTCAGCACCCCCTGTGCCCCTGACCTGTGCAGGGCTGTGGCCGGGGCCATCGCCCGCCAGCGGGAGCG
GCTGCCAGAGCTGACCAGGCCCCAGCCCTGCCCCCTGCCACGGGCCACCTCTCTGCCCTCCCTGGACACC
CCCGGAGAGCTTCGGGAGATGCCACCAGGACCTGAGCCACCCACGTCCAGGAAAATGCACCTGGCCGAGC
CCGGACCCCAGAGCCTGCCGCTACTGCTAGGCCCGGAGCCCAACGATCTGGCGTCCGGGCTCTACGCTTC
AGTGTGCAAGCGTGCCAGTGGGCCCCCAGGCAATGAGCACCTCTATGAGAACCTGTGTGTGCTGGAGGCC
AGCCCCACGCTGCACGGTGGGGAACCTGAGCCGCACGAGGGCCCCGGCAGCCGCAGCCCCACAACCAGTC
CCATCTACCACAACGGCCAGGACTTGAGCTGGCCCGGCCCGGCCAACGACAGTACCCTGGAGGCCCAGTA
CCGGCGGCTGCTGGAGCTGGATCAGGTGGAGGGCACAGGCCGCCCTGACCCTCAGGCAGGTTTCAAGGCC
AAGCTGGTGACCCTGCTGAGTCGTGAGCGGAGGAAGGGCCCAGCCCCTTGTGACCGGCCCTGA

Translation (440 aa):
MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRSAGPGRRGERR
VIRLADCVSVLPADGESCPRDTGAFLLTTTERSHLLAAQHRQAWMGPICQLAFPGTGEASSGSTDAQSPK
RGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLKGPALLVLGPDAIQLREAKGTQALYSWPYHFLRK
FGSDKGVFSFEAGRRCHSGEGLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDT
PGELREMPPGPEPPTSRKMHLAEPGPQSLPLLLGPEPNDLASGLYASVCKRASGPPGNEHLYENLCVLEA
SPTLHGGEPEPHEGPGSRSPTTSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKA
KLVTLLSRERRKGPAPCDRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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