NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS77791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77791.1 Public Homo sapiens 3 NAA50 24 110 108 CCDS HistoryNCBI Gene:80218Re-query CCDS DB by CCDS ID:77791.1Re-query CCDS DB by GeneID:80218See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000493900.5 ENSP00000417837.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000493900.5Link to Ensembl Protein Viewer:ENSP00000417837.1Re-query CCDS DB by Nucleotide ID:ENST00000493900Re-query CCDS DB by Protein ID:ENSP00000417837
Original member Current member NCBI NM_001308445.2 NP_001295374.1 Accepted alive Link to Nucleotide Sequence:NM_001308445.2Link to Protein Sequence:NP_001295374.1Re-query CCDS DB by Nucleotide ID:NM_001308445Re-query CCDS DB by Protein ID:NP_001295374Link to BLAST:NP_001295374.1

Chromosomal Locations for CCDS 77791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 113721760 113721937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113722906 113722972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113723422 113723541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113723959 113724092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113745942 113745949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGAAAGGCCGGATCGAGCTGGGAGATGTGACACCACACAATATTAAACAGTTGAAAAGATTGAATCAGG
TCATCTTTCCAGTCAGCTACAATGACAAGTTCTACAAGGATGTGCTGGAGGTTGGCGAGCTAGCAAAACT
TGCCTATTTCAATGATATTGCTGTAGGTGCAGTATGCTGTAGGGTGGATCATTCACAGAATCAGAAGAGA
CTTTACATCATGACACTAGGATGTCTGGCACCTTACCGAAGGCTAGGAATAGGAACTAAAATGTTAAATC
ATGTCTTAAACATCTGTGAAAAAGATGGTACTTTTGACAACATTTATCTGCATGTCCAGATCAGCAATGA
GTCGGCAATTGACTTCTACAGGAAGTTTGGCTTTGAGATTATTGAGACAAAGAAGAACTACTATAAGAGG
ATAGAGCCCGCAGATGCTCATGTGCTGCAGAAAAACCTCAAAGTTCCTTCTGGTCAGAATGCAGATGTGC
AAAAGACAGACAACTGA

Translation (168 aa):
MKGRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKR
LYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKR
IEPADAHVLQKNLKVPSGQNADVQKTDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH