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Report for CCDS77722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77722.1 Public Homo sapiens 3 STAC 24 110 108 CCDS HistoryNCBI Gene:6769Re-query CCDS DB by CCDS ID:77722.1Re-query CCDS DB by GeneID:6769See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457375.6 ENSP00000393713.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457375.6Link to Ensembl Protein Viewer:ENSP00000393713.2Re-query CCDS DB by Nucleotide ID:ENST00000457375Re-query CCDS DB by Protein ID:ENSP00000393713
Original member Current member NCBI NM_001292049.2 NP_001278978.1 Accepted alive Link to Nucleotide Sequence:NM_001292049.2Link to Protein Sequence:NP_001278978.1Re-query CCDS DB by Nucleotide ID:NM_001292049Re-query CCDS DB by Protein ID:NP_001278978Link to BLAST:NP_001278978.1

Chromosomal Locations for CCDS 77722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 36380644 36380754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36443364 36443640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36486134 36486249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36493151 36493229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36504393 36504457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36505746 36505834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36528696 36528747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36528848 36528985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 36546191 36546289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGATCCCTCCGAGCAGCCCCCGCGAGGACGGCGTGGACGGGCTGCCCAAGGAGGCGGTGGGCGCCGAGC
AACCGCCCTCTCCTGCATCCACCAGCAGCCAGGAATCCAAGCTCCAGAAACTAAAACGATCACTTTCTTT
CAAGACCAAGAGTTTACGGAGCAAAAGTGCTGACAACTTCTTCCAGCGAACCAACAGCGAAGACATGAAA
CTGCAAGCACACATGGTGGCTGAGATCAGCCCCAGCTCCAGCCCACTCCCTGCTCCAGGAAGCCTGACGT
CCACACCCGCCAGGGCTGGTCTGCATCCAGGTGGCAAGGCTCATGCCTTTCAGGAATACATCTTCAAGAA
GCCCACTTTCTGTGATGTCTGCAACCACATGATAGTGGCCTGTGGCAATAAGGTGGACCCTGTCTACGAG
ACCCTCCGCTTCGGCACCTCCCTGGCCCAGAGGACAAAGAAGGGCAGCTCCGGCAGTGGCTCTGACTCAC
CTCACAGAACCTCTACTTCAGATCTTGTGGAGGTTCCTGAGGAAGCCAATGGGCCAGGAGGCGGGTATGA
CCTAAGGAAACGCAGCAACAGCGTGTTTACATATCCAGAAAATGGCACTGATGATTTCAGAGATCCAGCG
AAGAACATAAACCACCAGGGATCTCTTTCCAAAGACCCATTACAGATGAACACCTATGTTGCCTTGTACA
AATTTGTACCACAGGAGAATGAAGATTTGGAAATGAGGCCAGGAGACATAATTACTCTTTTAGAGGATTC
CAATGAAGACTGGTGGAAAGGGAAAATTCAAGACAGAATTGGCTTCTTTCCAGCCAACTTTGTTCAGAGA
CTACAACAAAATGAGAAGATTTTTAGATGTGTTAGAACCTTCATTGGGTGTAAGGAACAGGGGCAGATAA
CACTGAAAGAGAATCAGATCTGCGTGAGTTCTGAAGAAGAACAAGATGGTTTTATCAGAGTCCTCAGTGG
AAAAAAGAAAGGCCTCATCCCCCTTGATGTACTAGAAAACATCTGA

Translation (341 aa):
MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNFFQRTNSEDMK
LQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIFKKPTFCDVCNHMIVACGNKVDPVYE
TLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPA
KNINHQGSLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQR
LQQNEKIFRCVRTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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