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Report for CCDS77326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77326.1 Public Homo sapiens 19 TMEM143 24 110 108 CCDS HistoryNCBI Gene:55260Re-query CCDS DB by CCDS ID:77326.1Re-query CCDS DB by GeneID:55260See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77326.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435956.7 ENSP00000397038.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435956.7Link to Ensembl Protein Viewer:ENSP00000397038.2Re-query CCDS DB by Nucleotide ID:ENST00000435956Re-query CCDS DB by Protein ID:ENSP00000397038
Original member Current member NCBI NM_001303538.2 NP_001290467.1 Accepted alive Link to Nucleotide Sequence:NM_001303538.2Link to Protein Sequence:NP_001290467.1Re-query CCDS DB by Nucleotide ID:NM_001303538Re-query CCDS DB by Protein ID:NP_001290467Link to BLAST:NP_001290467.1

Chromosomal Locations for CCDS 77326.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48333219 48333433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48334008 48334197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48342530 48342809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48343321 48343451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48345160 48345354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48363291 48363531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48363898 48363920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGACAGTCGAGCTTTGGCTAAGGCTCCGGGGAAAGGGTCTAGCCATGCTGCATGTGACCCGGGGGGTCT
GGGGGTCCAGGGTCCGAGTATGGCCACTGTTGCCCGCGCTCCTCGGGCCCCCCCGGGCCCTCTCATCGCT
GGCAGCCAAAATGGGGGAGTATCGCAAGATGTGGAACCCCAGGGAGCCCCGCGACTGGGCCCAGCAGTAC
CGCGAGCGCTTCATTCCCTTCTCCAAGGAGCAGCTGCTCCGCCTCCTAATACAGGCCTTATATGACCCCA
TCAACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGA
GGTGCTTCGGGCTCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCCTGGCC
TACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGGATCAGTATGTCTACA
TTCACTTCTGGGCCCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGCGTGG
CTTCTTCACCAAGCTGCCCCCTGCGGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAA
CGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGC
TGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGAT
CTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTC
GCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGG
CGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCA
GGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGC
TCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTG
AGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCC
ACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGC
AGTAACATCTCCTGA

Translation (424 aa):
MTVELWLRLRGKGLAMLHVTRGVWGSRVRVWPLLPALLGPPRALSSLAAKMGEYRKMWNPREPRDWAQQY
RERFIPFSKEQLLRLLIQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLA
YALVVHHPQDEVQVTVNLDQYVYIHFWALGQRVGQMPLKSSVGSRRGFFTKLPPAERRYFKRVVLAARTK
RGHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLF
AIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQG
SPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQATPS
SNIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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