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Report for CCDS77221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77221.1 Public Homo sapiens 19 MICOS13 24 110 108 CCDS HistoryNCBI Gene:125988Re-query CCDS DB by CCDS ID:77221.1Re-query CCDS DB by GeneID:125988See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77221.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587950.5 ENSP00000468723.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587950.5Link to Ensembl Protein Viewer:ENSP00000468723.1Re-query CCDS DB by Nucleotide ID:ENST00000587950Re-query CCDS DB by Protein ID:ENSP00000468723
Original member Current member NCBI NM_001308240.2 NP_001295169.1 Accepted alive Link to Nucleotide Sequence:NM_001308240.2Link to Protein Sequence:NP_001295169.1Re-query CCDS DB by Nucleotide ID:NM_001308240Re-query CCDS DB by Protein ID:NP_001295169Link to BLAST:NP_001295169.1
Original member Current member NCBI NM_001365761.2 NP_001352690.1 Accepted alive Link to Nucleotide Sequence:NM_001365761.2Link to Protein Sequence:NP_001352690.1Re-query CCDS DB by Nucleotide ID:NM_001365761Re-query CCDS DB by Protein ID:NP_001352690Link to BLAST:NP_001352690.1

Chromosomal Locations for CCDS 77221.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5678551 5678648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5679345 5679396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5679586 5679763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5680055 5680149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGAGAAGTGAATGCGTGCTCGGAGCTGCGAGTGACAGCGGGCAGGAGGCGCCCAGGGACACTTGGTTTC
TCCAGGGCTGGAAGGCTTCTAGAAGGTTCCTCATCAAGGGAAGTGTGGCTGGGGGCGCCGTCTACCTGGT
GTACGACCAGGAGCTGCTGGGGCCCAGCGACAAGAGCCAGGCAGCCCTACAGAAGGCTGGGGAGGTGGTC
CCCCCCGCCATGTACCAGTTCAGCCAGTACGTGTGTCAGCAGACAGGCCTGCAGATACCCCAGCTCCCAG
CCCCTCCAAAGATTTACTTTCCCATCCGTGACTCCTGGAATGCAGGCATCATGACGGTGATGTCAGCTCT
GTCGGTGGCCCCCTCCAAGGCCCGCGAGTACTCCAAGGAGGGCTGGGAGTATGTGAAGGCGCGCACCAAG
TAG

Translation (140 aa):
MRSECVLGAASDSGQEAPRDTWFLQGWKASRRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVV
PPAMYQFSQYVCQQTGLQIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKARTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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