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Report for CCDS77197.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77197.1 Public Homo sapiens 18 CD226 24 110 108 CCDS HistoryNCBI Gene:10666Re-query CCDS DB by CCDS ID:77197.1Re-query CCDS DB by GeneID:10666See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77197.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000577287.5 ENSP00000462453.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000577287.5Link to Ensembl Protein Viewer:ENSP00000462453.1Re-query CCDS DB by Nucleotide ID:ENST00000577287Re-query CCDS DB by Protein ID:ENSP00000462453
Original member Current member EBI ENST00000581982.5 ENSP00000464084.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000581982.5Link to Ensembl Protein Viewer:ENSP00000464084.1Re-query CCDS DB by Nucleotide ID:ENST00000581982Re-query CCDS DB by Protein ID:ENSP00000464084
Original member Current member NCBI NM_001303619.2 NP_001290548.1 Accepted alive Link to Nucleotide Sequence:NM_001303619.2Link to Protein Sequence:NP_001290548.1Re-query CCDS DB by Nucleotide ID:NM_001303619Re-query CCDS DB by Protein ID:NP_001290548Link to BLAST:NP_001290548.1

Chromosomal Locations for CCDS 77197.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 69864314 69864439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69867357 69867411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69873144 69873246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69895701 69895962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGACGTGGCCTGTGCAGGCAGTGAGGTGGGAAAAGATCCAGCCCCGTCAGATCGACCTCTTAACTTACT
GCAACTTGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGCAGCCACGG
AAGGTGGAGCGTCATCGTCATCCCCGATGTCACAGTCTCAGACTCGGGGCTTTACCGCTGCTACTTGCAG
GCCAGCGCAGGAGAAAACGAAACCTTCGTGATGAGATTGACTGTAGCCGAGGGTAAAACCGATAACCAAT
ATACCCTCTTTGTGGCTGGAGGGACAGTTTTATTGTTGTTGTTTGTTATCTCAATTACCACCATCATTGT
CATTTTCCTTAACAGAAGGAGAAGGAGAGAGAGAAGAGATCTATTTACAGAGTCCTGGGATACACAGAAG
GCACCCAATAACTATAGAAGTCCCATCTCTACCAGTCAACCTACCAATCAATCCATGGATGATACAAGAG
AGGATATTTATGTCAACTATCCAACCTTCTCTCGCAGACCAAAGACTAGAGTTTAA

Translation (181 aa):
MTWPVQAVRWEKIQPRQIDLLTYCNLVHGRNFTSKFPRQIVSNCSHGRWSVIVIPDVTVSDSGLYRCYLQ
ASAGENETFVMRLTVAEGKTDNQYTLFVAGGTVLLLLFVISITTIIVIFLNRRRRRERRDLFTESWDTQK
APNNYRSPISTSQPTNQSMDDTREDIYVNYPTFSRRPKTRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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