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Report for CCDS7679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7679.1 Public Homo sapiens 10 PRAP1 24 110 108 CCDS HistoryNCBI Gene:118471Re-query CCDS DB by CCDS ID:7679.1Re-query CCDS DB by GeneID:118471See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433452.6 ENSP00000416126.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000433452.6Link to Ensembl Protein Viewer:ENSP00000416126.2Re-query CCDS DB by Nucleotide ID:ENST00000433452Re-query CCDS DB by Protein ID:ENSP00000416126
Original member Current member NCBI NM_145202.5 NP_660203.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145202.5Link to Protein Sequence:NP_660203.3Re-query CCDS DB by Nucleotide ID:NM_145202Re-query CCDS DB by Protein ID:NP_660203Link to BLAST:NP_660203.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660203.3 151 Q96NZ9-1 151 100% 0 0

Chromosomal Locations for CCDS 7679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133347418 133347425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133350095 133350161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133351381 133351433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133352007 133352140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133352247 133352440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGAGGAGGCTCCTCCTGGTCACCAGCCTGGTGGTTGTGCTGCTGTGGGAGGCAGGTGCAGTCCCAGCAC
CCAAGGTCCCTATCAAGATGCAAGTCAAACACTGGCCCTCAGAGCAGGACCCAGAGAAGGCCTGGGGCGC
CCGTGTGGTGGAGCCTCCGGAGAAGGACGACCAGCTGGTGGTGCTGTTCCCTGTCCAGAAGCCGAAACTC
TTGACCACCGAGGAGAAGCCACGAGGTCAGGGCAGGGGCCCCATCCTTCCAGGCACCAAGGCCTGGATGG
AGACCGAGGACACCCTGGGCCATGTCCTGAGTCCCGAGCCCGACCATGACAGCCTGTACCACCCTCCGCC
TGAGGAGGACCAGGGCGAGGAGAGGCCCCGGTTGTGGGTGATGCCAAATCACCAGGTGCTCCTGGGACCG
GAGGAAGACCAAGACCACATCTACCACCCCCAGTAG

Translation (151 aa):
MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLVVLFPVQKPKL
LTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEEDQGEERPRLWVMPNHQVLLGP
EEDQDHIYHPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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