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Report for CCDS7676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7676.1 Public Homo sapiens 10 TUBGCP2 24 110 108 CCDS HistoryNCBI Gene:10844Re-query CCDS DB by CCDS ID:7676.1Re-query CCDS DB by GeneID:10844See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7676.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252936.8 ENSP00000252936.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252936.8Link to Ensembl Protein Viewer:ENSP00000252936.3Re-query CCDS DB by Nucleotide ID:ENST00000252936Re-query CCDS DB by Protein ID:ENSP00000252936
Original member Current member EBI ENST00000682515.1 ENSP00000506731.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682515.1Link to Ensembl Protein Viewer:ENSP00000506731.1Re-query CCDS DB by Nucleotide ID:ENST00000682515Re-query CCDS DB by Protein ID:ENSP00000506731
Original member Current member EBI ENST00000683612.1 ENSP00000507482.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683612.1Link to Ensembl Protein Viewer:ENSP00000507482.1Re-query CCDS DB by Nucleotide ID:ENST00000683612Re-query CCDS DB by Protein ID:ENSP00000507482
Original member Current member EBI ENST00000682123.1 ENSP00000507610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682123.1Link to Ensembl Protein Viewer:ENSP00000507610.1Re-query CCDS DB by Nucleotide ID:ENST00000682123Re-query CCDS DB by Protein ID:ENSP00000507610
Original member Current member NCBI NM_006659.4 NP_006650.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006659.4Link to Protein Sequence:NP_006650.1Re-query CCDS DB by Nucleotide ID:NM_006659Re-query CCDS DB by Protein ID:NP_006650Link to BLAST:NP_006650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006650.1 902 Q9BSJ2-1 902 100% 0 0

Chromosomal Locations for CCDS 7676.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133279766 133279901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133281273 133281436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133282223 133282342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133283078 133283221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133283882 133284002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133285085 133285213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133285456 133285628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133288129 133288309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133288840 133289020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133289824 133289969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133292499 133292688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133293039 133293238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133293562 133293769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133297952 133298111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133299427 133299603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133299985 133300113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133302792 133302941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2709 nt):
ATGAGTGAATTTCGGATTCACCATGACGTCAATGAACTGCTTAGCCTGCTGCGTGTCCACGGAGGAGATG
GGGCTGAGGTCTACATTGACCTGCTTCAAAAGAACAGGACCCCGTACGTCACTACCACTGTCTCTGCTCA
CAGTGCCAAGGTTAAAATTGCAGAGTTTTCTCGTACTCCAGAAGACTTTCTAAAGAAATATGATGAACTG
AAATCTAAAAATACAAGGAACCTTGACCCGCTGGTGTACCTGTTGTCAAAGCTCACGGAAGACAAAGAGA
CTCTGCAGTACTTACAACAGAATGCAAAAGAAAGAGCTGAGCTTGCAGCCGCTGCTGTGGGCAGCAGTAC
CACCAGCATCAACGTCCCTGCCGCGGCCTCCAAGATCTCCATGCAGGAGCTTGAGGAACTGAGGAAGCAG
CTTGGCAGCGTGGCCACAGGCTCCACGCTGCAGCAGTCTCTGGAACTTAAAAGAAAGATGCTTCGAGACA
AGCAGAACAAAAAAAATTCAGGCCAGCACCTCCCCATCTTCCCAGCATGGGTGTATGAGAGACCTGCCCT
GATCGGGGATTTCCTGATTGGTGCTGGCATCAGCACAGACACCGCTTTGCCGATAGGCACGTTGCCCCTG
GCCTCGCAGGAGTCGGCCGTGGTGGAGGACCTGCTGTACGTGCTGGTGGGCGTGGACGGGAGGTACGTCA
GTGCTCAGCCCCTGGCTGGGAGGCAGAGCCGGACCTTCCTCGTGGACCCCAACCTGGACCTGTCCATCAG
GGAGCTGGTGCACAGGATCCTCCCAGTGGCCGCCAGCTACTCCGCTGTGACCAGGTTCATTGAAGAGAAG
TCTTCCTTCGAGTACGGGCAGGTGAACCACGCCCTGGCGGCCGCCATGCGCACCCTGGTGAAGGAGCACC
TGATTCTGGTGTCACAGCTGGAGCAGCTGCACAGGCAGGGCCTCCTTTCGCTGCAGAAGCTCTGGTTCTA
CATCCAGCCAGCCATGCGCACCATGGACATCCTGGCCTCCCTCGCCACCTCGGTGGACAAAGGCGAATGT
CTTGGGGGGTCCACGCTGAGCCTGCTCCACGACAGGAGCTTCAGCTACACAGGGGACAGCCAGGCGCAGG
AGCTATGCCTGTACCTAACCAAGGCGGCCAGTGCTCCCTACTTCGAGGTTCTGGAGAAGTGGATCTACAG
GGGCATCATCCACGACCCATACAGTGAGTTTATGGTCGAGGAGCACGAGCTGCGGAAGGAGAGGATCCAG
GAGGATTACAACGACAAGTACTGGGACCAGCGGTACACCATCGTCCAGCAGCAGATCCCGTCCTTCCTGC
AGAAAATGGCGGACAAGATCCTCAGCACAGGAAAATATCTAAATGTGGTCAGAGAGTGTGGCCATGACGT
CACCTGCCCGGTGGCTAAAGAGATCATCTACACGTTAAAAGAGCGGGCGTATGTGGAGCAGATCGAGAAG
GCGTTTAACTACGCCAGCAAGGTGCTGCTGGACTTCCTGATGGAGGAGAAGGAGCTGGTGGCTCACCTCA
GGTCCATCAAGCGCTACTTCCTCATGGACCAGGGCGACTTCTTCGTGCACTTCATGGACCTCGCGGAGGA
GGAGCTCCGGAAGCCGGTGGAGGACATCACGCCCCCTCGCCTGGAAGCGCTCCTGGAGCTGGCGCTGCGC
ATGAGCACGGCCAACACTGACCCCTTCAAGGACGACCTCAAGATCGACCTGATGCCCCATGACCTCATCA
CTCAGCTCTTGCGCGTCCTGGCCATCGAGACCAAGCAGGAGAAGGCGATGGCGCACGCCGACCCCACGGA
GCTGGCGCTGAGCGGCCTGGAGGCCTTCTCTTTCGACTACATCGTCAAGTGGCCCCTTTCGCTCATCATC
AACAGGAAAGCCCTCACTCGCTACCAGATGCTCTTCAGGCACATGTTCTACTGCAAGCACGTGGAGCGGC
AGCTCTGCAGCGTCTGGATCAGCAACAAAACCGCCAAGCAGCACTCGCTGCACTCCGCCCAGTGGTTTGC
TGGGGCTTTCACTCTGCGGCAGCGAATGCTCAACTTCGTCCAGAATATTCAATACTACATGATGTTTGAA
GTGATGGAACCGACCTGGCACATCCTGGAGAAAAACCTGAAATCCGCCTCCAACATTGACGACGTCCTTG
GCCACCACACAGGCTTCCTGGACACCTGCCTGAAGGACTGCATGCTCACCAACCCCGAGCTGCTGAAGGT
CTTCTCCAAGCTCATGTCTGTGTGCGTCATGTTCACCAACTGCATGCAGAAATTTACACAGAGCATGAAA
TTAGATGGCGAGCTGGGCGGGCAGACGCTGGAGCACAGCACCGTCCTGGGGCTGCCCGCAGGGGCCGAGG
AGCGGGCCCGGAAGGAGCTCGCCAGGAAGCACCTGGCTGAGCACGCAGACACTGTGCAGCTGGTGTCCGG
CTTCGAGGCCACCATCAACAAGTTTGACAAGAACTTCTCAGCCCACCTGCTGGACCTCCTGGCCCGGCTG
AGCATCTATAGCACCAGTGACTGTGAGCACGGCATGGCCAGCGTCATCTCCAGGCTTGACTTCAATGGTT
TCTACACGGAGCGCCTGGAGCGCCTGTCTGCAGAGAGGAGCCAGAAGGCCACCCCCCAAGTGCCTGTCCT
GCGGGGGCCCCCGGCTCCTGCACCCAGGGTCGCAGTCACCGCACAGTGA

Translation (902 aa):
MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTPEDFLKKYDEL
KSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAAAAVGSSTTSINVPAAASKISMQELEELRKQ
LGSVATGSTLQQSLELKRKMLRDKQNKKNSGQHLPIFPAWVYERPALIGDFLIGAGISTDTALPIGTLPL
ASQESAVVEDLLYVLVGVDGRYVSAQPLAGRQSRTFLVDPNLDLSIRELVHRILPVAASYSAVTRFIEEK
SSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGEC
LGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPYFEVLEKWIYRGIIHDPYSEFMVEEHELRKERIQ
EDYNDKYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEK
AFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALR
MSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLII
NRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAFTLRQRMLNFVQNIQYYMMFE
VMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPELLKVFSKLMSVCVMFTNCMQKFTQSMK
LDGELGGQTLEHSTVLGLPAGAEERARKELARKHLAEHADTVQLVSGFEATINKFDKNFSAHLLDLLARL
SIYSTSDCEHGMASVISRLDFNGFYTERLERLSAERSQKATPQVPVLRGPPAPAPRVAVTAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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