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Report for CCDS76613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76613.1 Public Homo sapiens 12 C12orf43 24 110 108 CCDS HistoryNCBI Gene:64897Re-query CCDS DB by CCDS ID:76613.1Re-query CCDS DB by GeneID:64897See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537817.5 ENSP00000442224.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537817.5Link to Ensembl Protein Viewer:ENSP00000442224.2Re-query CCDS DB by Nucleotide ID:ENST00000537817Re-query CCDS DB by Protein ID:ENSP00000442224
Original member Current member NCBI NM_001286191.2 NP_001273120.1 Accepted alive Link to Nucleotide Sequence:NM_001286191.2Link to Protein Sequence:NP_001273120.1Re-query CCDS DB by Nucleotide ID:NM_001286191Re-query CCDS DB by Protein ID:NP_001273120Link to BLAST:NP_001273120.1

Chromosomal Locations for CCDS 76613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 121004153 121004489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121005003 121005093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121006321 121006394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121010828 121010926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121011011 121011146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 121016330 121016474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGCGGCGCCCAGTGGCACAGTGAGCGATTCGGAAAGTAGTAACAGCAGTAGCGATGCGGAGGAGCTGG
AGCGGTGCCGCGAGGCGGCAATGCCGGCTTGGGGCTTGGAGCAACGCCCGCACGTGGCAGGGAAGCCAAG
AGCCGGTGCTGCAAATAGCCAGTTGTCAACCTCCCAACCGAGCCTCAGGTACTATGCACTTTGGGTTCAA
GTTTCACTTATTCAACAAATACTGATCCCCTGCGTGTGCCAGATGCTAGGCTTCACGCCTGGCATTTCCA
GGCATAAGGTGAATGAGCATGAACAAGATGGCAACGAGCTTCAGACCACCCCTGAATTCCGAGCCCACGT
AGCCAAGAAGCTGGGAGCCCTGCTGGACAGCTTCATTACCATCTCAGAAGCAGCAAAGGAGCCAGCAAAA
GCTAAGGTACAGAAAGTCGCTTTGGAGGATGATGGTTTCCGCCTTTTCTTCACATCTGTCCCTGGAGGCC
GTGAGAAGGAAGAGTCTCCCCAACCCCGCCGAAAGCGACAGCCCTCCAGCTCCAGTGAGGACAGTGACGA
GGAGTGGCGGCGGTGCCGGGAGGCAGCTGTGTCGGCGTCCGACATCCTACAGGAGTCAGCCATCCACAGC
CCTGGAACAGTGGAGAAGGAGGCAAAGAAGAAAAGGAAGTTGAAAAAGAAAGCCAAGAAGGTGGCCAGTG
TCGACTCGGCTGTCGCTGCCACCACCCCCACCAGCATGGCCACAGTCCAGAAGCAGAAGTCAGGTGAGCT
CAACGGGGACCAGGTGTCGCTTGGGACCAAAAAGAAGAAAAAGGCAAAGAAGGCCAGCGAGACCTCTCCA
TTCCCACCAGCAAAGAGTGCTACAGCTATACCTGCAAACTGA

Translation (293 aa):
MAAPSGTVSDSESSNSSSDAEELERCREAAMPAWGLEQRPHVAGKPRAGAANSQLSTSQPSLRYYALWVQ
VSLIQQILIPCVCQMLGFTPGISRHKVNEHEQDGNELQTTPEFRAHVAKKLGALLDSFITISEAAKEPAK
AKVQKVALEDDGFRLFFTSVPGGREKEESPQPRRKRQPSSSSEDSDEEWRRCREAAVSASDILQESAIHS
PGTVEKEAKKKRKLKKKAKKVASVDSAVAATTPTSMATVQKQKSGELNGDQVSLGTKKKKKAKKASETSP
FPPAKSATAIPAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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