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Report for CCDS76472.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76472.1 Public Homo sapiens 11 ELMOD1 24 110 108 CCDS HistoryNCBI Gene:55531Re-query CCDS DB by CCDS ID:76472.1Re-query CCDS DB by GeneID:55531See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76472.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531234.5 ENSP00000433232.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531234.5Link to Ensembl Protein Viewer:ENSP00000433232.1Re-query CCDS DB by Nucleotide ID:ENST00000531234Re-query CCDS DB by Protein ID:ENSP00000433232
Original member Current member NCBI NM_001308018.2 NP_001294947.1 Accepted alive Link to Nucleotide Sequence:NM_001308018.2Link to Protein Sequence:NP_001294947.1Re-query CCDS DB by Nucleotide ID:NM_001308018Re-query CCDS DB by Protein ID:NP_001294947Link to BLAST:NP_001294947.1

Chromosomal Locations for CCDS 76472.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 107630418 107630562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107630700 107630728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107631580 107631677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107635636 107635765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107647468 107647601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107650335 107650403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107650885 107650908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107654172 107654222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107655933 107656066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107665025 107665197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGTTGATCCAGGTATGCCTGTATTTTTACTGTAAATTTCTGTGGCGCTGCCTGAAATTTGTAATGAGGA
AGCTAACTGGAAGATGTGAACTACAACGGATCTGTTATAATACCAAGCCGGGAGCTTCTAGAACCATGAA
AATCGAAACATCACTGAGGGATTCTAAAAGTAAGCTGTTGCAGACTTCTGTGAGTGTTCACCCCGACGCT
ATTGAAAAAACTATAGAAGATATCATGGAACTGAAAAAAATTAATCCTGACGTAAATCCACAGCTGGGAA
TCTCTCTTCAGGCTTGCCTTCTGCAAATCGTTGGGTACAGGAACCTTATTGCAGATGTGGAAAAACTGCG
TAGAGAGGCCTATGATTCTGATAATCCCCAACATGAAGAAATGCTTTTGAAGTTATGGAAATTCTTGAAG
CCCAATACTCCACTGGAATCTCGGATTTCTAAGCAGTGGTGTGAAATTGGTTTCCAAGGTGATGATCCTA
AAACAGACTTTCGAGGAATGGGACTTCTGGGACTGTACAATTTGCAGTATTTCGCGGAAAGGGATGCCAC
AGCAGCTCAGCAGGTCCTGTCTGACTCTCTTCATCCGAAATGCAGGGATATCACTAAAGAAGAAATAAGC
AAATTCAGCAAAGCAGAATGGGAGAAGAAAAGGATGGATAAGGCAATTGGGTACTCATTTGCAATTGTGG
GCATCAATATAACTGACCTGGCATATAATCTACTGGTCAGCGGAGCTCTAAAAACCCATTTCTACAATAT
CGCCCCAGAAGCTCCAACATTGTCTCACTTTCAGCAAACATTCTGCTATTTGATGCATGAATTTCATAAG
TTTTGGATCGAAGAGGACCCCATGGACATAATGGAATTTAATCGTGTGAGGGAGAAATTCCGCAAGAGGA
TCATCAAACAGCTGCAGAACCCAGACATGGCGCTGTGCCCACATTTTGCTGCCTCGGAAGGTTTAATCAA
CATGTAG

Translation (328 aa):
MLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDSKSKLLQTSVSVHPDA
IEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVEKLRREAYDSDNPQHEEMLLKLWKFLK
PNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEIS
KFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHK
FWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMALCPHFAASEGLINM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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