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Report for CCDS76424.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76424.1 Public Homo sapiens 11 DNAJC4 24 110 108 CCDS HistoryNCBI Gene:3338Re-query CCDS DB by CCDS ID:76424.1Re-query CCDS DB by GeneID:3338See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76424.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321460.5 ENSP00000320548.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321460.5Link to Ensembl Protein Viewer:ENSP00000320548.5Re-query CCDS DB by Nucleotide ID:ENST00000321460Re-query CCDS DB by Protein ID:ENSP00000320548
Original member Current member NCBI NM_001307980.1 NP_001294909.1 Accepted alive Link to Nucleotide Sequence:NM_001307980.1Link to Protein Sequence:NP_001294909.1Re-query CCDS DB by Nucleotide ID:NM_001307980Re-query CCDS DB by Protein ID:NP_001294909Link to BLAST:NP_001294909.1

Chromosomal Locations for CCDS 76424.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64230855 64230940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64231871 64231964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64232430 64232614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64232701 64232865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64233894 64234113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGCCGCCCTTACTGCCCCTGCGCCTGTGCCGGCTGTGGCCCCGCAACCCTCCCTCCCGGCTCCTCGGAG
CGGCCGCCGGGCAGCGGTCCAGACCCAGTACTTATTATGAACTGTTGGGGGTGCATCCTGGTGCCAGCAC
TGAGGAAGTTAAACGAGCTTTCTTCTCCAAGTCCAAAGAGCTGCACCCAGACCGGGACCCTGGGAACCCA
AGCCTGCACAGCCGCTTTGTGGAGCTGAGCGAGGCATACCGTGTGCTCAGCCGTGAGCAGAGCCGCCGCA
GCTATGATGACCAGCTCCGCTCAGGTAGTCCCCCAAAGTCTCCACGAACCACAGTCCATGACAAGTCTGC
CCACCAAACACACAGCAGCTCCTGGACACCCCCCAACGCACAGTACTGGTCCCAGTTTCACAGCGTGAGG
CCACAGGGGCCCCAGTTGAGGCAGCAGCAACACAAACAAAACAAACAAGTGCTGGGGTACTGCCTCCTCC
TCATGCTGGCGGGCATGGGCCTGCACTACATTGCCTTCAGGAAGGTGAAGCAGATGCACCTTAACTTCAT
GGATGAAAAGGATCGGATCATCACAGCCTTCTACAACGAAGCCCGGGCACGGGCCAGGTCTGTCCCTGCT
CTATTCTGCTCCCTGCTCCCTGTCCAGGAACCACACTTCGGGATCCCTATCCCAACCACCCAGGTGCCCT
CTCCTCCAGGGCCAACAGAGGCATCCTTCAGCAGGAGCGACAACGGCTAG

Translation (249 aa):
MPPLLPLRLCRLWPRNPPSRLLGAAAGQRSRPSTYYELLGVHPGASTEEVKRAFFSKSKELHPDRDPGNP
SLHSRFVELSEAYRVLSREQSRRSYDDQLRSGSPPKSPRTTVHDKSAHQTHSSSWTPPNAQYWSQFHSVR
PQGPQLRQQQHKQNKQVLGYCLLLMLAGMGLHYIAFRKVKQMHLNFMDEKDRIITAFYNEARARARSVPA
LFCSLLPVQEPHFGIPIPTTQVPSPPGPTEASFSRSDNG


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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