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Report for CCDS7624.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7624.1 Public Homo sapiens 10 NSMCE4A 24 110 108 CCDS HistoryNCBI Gene:54780Re-query CCDS DB by CCDS ID:7624.1Re-query CCDS DB by GeneID:54780See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7624.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369023.8 ENSP00000358019.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369023.8Link to Ensembl Protein Viewer:ENSP00000358019.3Re-query CCDS DB by Nucleotide ID:ENST00000369023Re-query CCDS DB by Protein ID:ENSP00000358019
Original member Current member NCBI NM_017615.3 NP_060085.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017615.3Link to Protein Sequence:NP_060085.2Re-query CCDS DB by Nucleotide ID:NM_017615Re-query CCDS DB by Protein ID:NP_060085Link to BLAST:NP_060085.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060085.2 385 Q9NXX6-1 385 100% 0 0

Chromosomal Locations for CCDS 7624.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 121959336 121959410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121959501 121959595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121960358 121960406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121961423 121961517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121963238 121963328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121965286 121965385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121967655 121967806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121970939 121971069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121974004 121974081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 121974874 121975165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGTCTGGGGACAGCAGCGGCCGCGGGCCAGAGGGCCGGGGCCGGGGCCGCGACCCGCATCGGGATCGCA
CCCGCTCCCGCTCCCGCTCGCGGTCCCCTTTGTCGCCCAGGTCCCGCCGCGGCTCTGCGCGGGAGCGCAG
AGAGGCCCCAGAGCGCCCGAGCCTGGAGGACACAGAGCCGTCGGATTCCGGGGACGAGATGATGGACCCG
GCCAGCTTGGAGGCGGAGGCCGACCAAGGCCTGTGCCGCCAGATCCGCCATCAGTACCGGGCGCTCATCA
ACTCCGTCCAACAAAACCGTGAGGACATACTGAATGCCGGTGACAAATTAACAGAGGTCCTTGAAGAGGC
TAACACTCTGTTTAATGAAGTGTCCCGAGCAAGAGAAGCAGTCCTGGATGCCCACTTTCTTGTTTTGGCT
TCAGATTTGGGCAAAGAGAAAGCAAAGCAGCTGCGCTCAGACCTGAGCTCCTTTGACATGTTAAGATATG
TTGAAACTCTACTCACACATATGGGTGTAAATCCGCTAGAAGCTGAAGAACTCATCCGTGATGAAGATAG
TCCTGATTTTGAATTCATAGTCTATGACTCCTGGAAGATAACAGGCAGAACAGCAGAAAACACCTTTAAT
AAAACCCATACATTCCACTTTCTGTTGGGTTCAATATACGGAGAGTGCCCTGTGCCAAAGCCACGAGTTG
ATCGTCCAAGAAAAGTTCCTGTGATACAAGAGGAGAGGGCAATGCCTGCCCAGTTAAGAAGAATGGAAGA
ATCTCATCAAGAAGCAACAGAGAAAGAAGTAGAAAGAATCTTGGGATTGTTGCAGACATATTTTCGAGAA
GATCCTGATACCCCAATGTCCTTCTTTGACTTTGTGGTTGATCCTCATTCTTTCCCCCGTACAGTGGAAA
ACATCTTTCATGTTTCCTTCATTATACGGGATGGTTTTGCAAGAATAAGACTTGACCAAGACCGACTGCC
AGTAATAGAGCCTGTTAGTATTAATGAAGAAAATGAGGGATTTGAACATAACACACAAGTTAGAAATCAA
GGAATTATAGCTTTGAGTTACCGTGACTGGGAGGAGATTGTGAAGACCTTTGAGATTTCAGAGCCTGTGA
TTACTCCAAGTCAGAGGCAGCAGAAGCCAAGTGCTTGA

Translation (385 aa):
MSGDSSGRGPEGRGRGRDPHRDRTRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSGDEMMDP
ASLEAEADQGLCRQIRHQYRALINSVQQNREDILNAGDKLTEVLEEANTLFNEVSRAREAVLDAHFLVLA
SDLGKEKAKQLRSDLSSFDMLRYVETLLTHMGVNPLEAEELIRDEDSPDFEFIVYDSWKITGRTAENTFN
KTHTFHFLLGSIYGECPVPKPRVDRPRKVPVIQEERAMPAQLRRMEESHQEATEKEVERILGLLQTYFRE
DPDTPMSFFDFVVDPHSFPRTVENIFHVSFIIRDGFARIRLDQDRLPVIEPVSINEENEGFEHNTQVRNQ
GIIALSYRDWEEIVKTFEISEPVITPSQRQQKPSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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