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Report for CCDS76192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76192.1 Public Homo sapiens 1 AP4B1 24 110 108 CCDS HistoryNCBI Gene:10717Re-query CCDS DB by CCDS ID:76192.1Re-query CCDS DB by GeneID:10717See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76192.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369567.5 ENSP00000358580.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369567.5Link to Ensembl Protein Viewer:ENSP00000358580.1Re-query CCDS DB by Nucleotide ID:ENST00000369567Re-query CCDS DB by Protein ID:ENSP00000358580
Original member Current member NCBI NM_001308312.2 NP_001295241.1 Accepted alive Link to Nucleotide Sequence:NM_001308312.2Link to Protein Sequence:NP_001295241.1Re-query CCDS DB by Nucleotide ID:NM_001308312Re-query CCDS DB by Protein ID:NP_001295241Link to BLAST:NP_001295241.1

Chromosomal Locations for CCDS 76192.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 113895065 113895492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113895757 113896038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113896258 113896465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113897840 113897943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113898718 113898801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113899904 113900400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113904605 113904717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGCCGTACCTTGGCTCCGAGGACGTGGTGAAGGAGCTGAAGAAGGCTCTGTGCAATCCTCACATTCAAG
CTGATAGGCTGCGCTACCGGAATGTCATCCAGCGAGTGATTAGAATGTCAAAACTGGACCAATGGGGCCA
GGCTGAAGTATTGAACTTTCTGCTACGCTACCAACCCCGCAGTGAGGAAGAACTATTTGACATTCTCAAT
CTGTTGGATAGTTTCCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCTACCAAACTTTTTCTGATCT
TGGCAAAAATGTTTCCCCACGTACAAACTGATGTCCTTGTGCGGGTCAAGGGACCTTTGCTAGCTGCCTG
TTCTTCAGAGAGCCGTGAGCTCTGTTTTGTTGCTCTTTGTCATGTACGCCAGATCTTGCATAGTTTACCA
GGTCACTTTAGCAGCCACTACAAAAAGTTTTTTTGCTCCTACTCGGAGCCCCACTACATCAAACTACAGA
AAGTGGAGGTGCTGTGTGAACTGGTGAACGATGAGAATGTGCAGCAGGTGCTAGAGGAGCTTCGAGGGTA
CTGCACGGATGTGTCTGCGGACTTTGCACAGGCTGCCATCTTTGCCATAGGTGGCATTGCCAGGACTTAC
ACAGATCAATGTGTTCAGATTTTAACAGAGTTGCTGGGTCTTCGACAAGAGCACATTACCACAGTGGTGG
TGCAGACTTTCCGAGACCTGGTTTGGTTGTGTCCTCAGTGTACTGAAGCTGTATGTCAGGCCCTGCCCGG
CTGTGAAGAGAACATTCAAGATAGTGAGGGGAAGCAAGCACTTATTTGGCTACTTGGTGTCCATGGGGAA
AGAATTCCTAATGCTCCTTATGTGTTAGAGGACTTTGTTGAGAATGTGAAGTCGGAAACATTTCCAGCTG
TTAAGATGGAGCTGCTCACTGCTTTGCTGCGCCTTTTCCTCTCCCGACCTGCTGAGTGCCAGGACATGCT
AGGACGTTTGTTGTATTACTGCATAGAGGAAGAAAAAGATATGGCTGTACGGGACCGAGGTCTCTTCTAT
TATCGCCTCCTCTTAGTTGGCATTGATGAAGTTAAGCGGATTCTGTGTAGCCCTAAATCTGACCCTACTC
TTGGACTTTTGGAGGATCCGGCAGAAAGACCTGTGAATAGCTGGGCCTCAGACTTCAACACACTGGTGCC
AGTGTATGGCAAAGCCCACTGGGCAACTATCTCTAAATGCCAGGGGGCAGAGCGTTGTGACCCAGAGCTT
CCTAAAACTTCATCCTTTGCCGCATCAGGACCCTTGATTCCTGAAGAGAACAAGGAGAGGGTACAAGAAC
TCCCTGATTCTGGAGCCCTCATGCTAGTCCCCAATCGCCAGCTTACTGCTGATTATTTTGAGAAAACTTG
GCTTAGCCTTAAAGTTGCTCATCAGCAAGTGTTGCCTTGGCGGGGAGAATTCCATCCTGACACCCTCCAG
ATGGCTCTTCAAGTAGTGAACATCCAGACCATCGCAATGAGTAGGGCTGGGTCTCGGCCATGGAAAGCAT
ACCTCAGTGCTCAGGATGATACTGGCTGTCTGTTCTTAACAGAACTGCTATTGGAGCCTGGAAACTCAGA
AATGCAGATCTCTGTGAAACAAAATGAAGCAAGAACGGAGACGCTGAATAGTTTTATTTCTGTATTAGAA
ACTGTGATTGGAACAATTGAAGAAATAAAATCATAA

Translation (571 aa):
MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILN
LLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLP
GHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTY
TDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGE
RIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFY
YRLLLVGIDEVKRILCSPKSDPTLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPEL
PKTSSFAASGPLIPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQ
MALQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETLNSFISVLE
TVIGTIEEIKS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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