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Report for CCDS7608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7608.1 Public Homo sapiens 10 EIF3A 24 110 108 CCDS HistoryNCBI Gene:8661Re-query CCDS DB by CCDS ID:7608.1Re-query CCDS DB by GeneID:8661See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7608.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369144.8 ENSP00000358140.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369144.8Link to Ensembl Protein Viewer:ENSP00000358140.3Re-query CCDS DB by Nucleotide ID:ENST00000369144Re-query CCDS DB by Protein ID:ENSP00000358140
Original member Current member EBI ENST00000541549.2 ENSP00000438178.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541549.2Link to Ensembl Protein Viewer:ENSP00000438178.2Re-query CCDS DB by Nucleotide ID:ENST00000541549Re-query CCDS DB by Protein ID:ENSP00000438178
Original member Current member NCBI NM_003750.4 NP_003741.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003750.4Link to Protein Sequence:NP_003741.1Re-query CCDS DB by Nucleotide ID:NM_003750Re-query CCDS DB by Protein ID:NP_003741Link to BLAST:NP_003741.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003741.1 1382 Q14152-1 1382 100% 0 0

Chromosomal Locations for CCDS 7608.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 119036039 119036268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119037119 119037309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119038238 119038439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119041994 119042772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119044054 119044142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119049801 119049985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119050521 119050674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119051199 119051321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119056740 119056853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119056936 119057040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119057956 119058303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119059212 119059397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119059602 119059718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119060746 119060844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119061224 119061328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119065399 119065570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119069446 119069654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119070886 119071085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119072890 119073053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119073441 119073577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119073747 119073937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 119080628 119080676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4149 nt):
ATGCCGGCCTATTTTCAGAGGCCGGAAAATGCCCTCAAACGCGCCAACGAATTTCTTGAGGTTGGCAAAA
AGCAGCCTGCTCTGGATGTTCTTTATGATGTTATGAAAAGTAAAAAACATAGAACATGGCAAAAGATACA
CGAACCAATTATGTTGAAATACTTGGAACTTTGCGTGGATCTTCGCAAGAGCCACTTGGCAAAGGAGGGG
TTATACCAGTATAAGAACATTTGTCAACAGGTGAACATAAAATCTCTGGAGGATGTTGTTAGGGCATATT
TGAAAATGGCAGAGGAAAAAACTGAAGCTGCTAAAGAAGAATCTCAGCAGATGGTCTTAGATATAGAGGA
TCTAGATAATATTCAAACTCCTGAGAGTGTTCTCCTAAGTGCTGTAAGTGGTGAAGACACTCAGGATCGT
ACTGACAGATTACTTTTAACTCCATGGGTTAAATTCCTGTGGGAGTCTTACAGGCAGTGTTTGGACCTTC
TTAGAAACAATTCTAGAGTAGAGCGCCTGTACCATGATATTGCCCAGCAAGCTTTCAAATTCTGCCTCCA
ATACACGCGTAAGGCTGAATTCCGTAAACTGTGTGACAATTTGAGAATGCACTTATCGCAGATTCAGCGC
CACCATAACCAAAGTACGGCAATCAATCTTAATAATCCAGAGAGCCAGTCCATGCATTTGGAAACCAGAC
TTGTTCAGCTGGACAGTGCTATCAGCATGGAATTGTGGCAGGAAGCATTCAAAGCTGTGGAAGATATTCA
CGGGCTATTCTCCTTGTCTAAAAAACCACCTAAACCTCAGTTGATGGCAAATTACTATAACAAAGTCTCA
ACTGTGTTTTGGAAATCTGGAAATGCTCTTTTTCATGCATCTACACTCCATCGTCTTTACCATCTCTCTA
GAGAAATGAGAAAGAATCTCACACAAGATGAGATGCAAAGAATGTCTACTAGAGTCCTTTTAGCCACTCT
TTCCATCCCTATTACTCCTGAGCGTACGGATATTGCTCGACTTCTGGATATGGATGGCATTATAGTTGAA
AAACAGCGTCGCCTTGCAACACTACTAGGTCTTCAAGCCCCACCGACACGAATTGGCCTTATTAATGATA
TGGTCAGATTTAATGTACTACAATATGTTGTCCCAGAAGTGAAAGACCTTTACAATTGGCTTGAAGTAGA
ATTTAACCCATTAAAACTCTGTGAGCGAGTCACAAAGGTTCTAAATTGGGTTAGGGAACAACCTGAAAAG
GAACCGGAATTGCAGCAGTATGTGCCACAACTGCAAAACAACACCATCCTCCGCCTTCTGCAGCAGGTGT
CACAGATTTATCAGAGCATTGAGTTTTCTCGTTTGACTTCTTTGGTTCCTTTTGTTGATGCTTTCCAACT
GGAACGGGCCATAGTAGATGCAGCCAGGCATTGCGACTTGCAGGTTCGTATTGATCACACTTCTCGGACC
CTGAGTTTTGGATCTGATTTGAATTATGCTACTCGAGAAGATGCTCCGATTGGTCCTCATTTGCAAAGCA
TGCCTTCAGAGCAGATAAGAAACCAGCTGACAGCCATGTCCTCAGTACTTGCAAAAGCACTTGAAGTCAT
TAAACCAGCTCATATACTGCAAGAGAAAGAAGAACAGCATCAGTTGGCTGTCACTGCATACCTTAAAAAT
TCACGAAAAGAGCACCAGCGGATCCTGGCTCGCCGCCAGACAATTGAGGAGAGAAAAGAGCGCCTTGAGA
GTCTGAATATTCAGCGTGAGAAAGAAGAATTGGAACAGAGGGAAGCTGAACTCCAGAAAGTGCGGAAGGC
TGAGGAAGAGAGGCTGCGCCAGGAAGCAAAGGAGAGAGAGAAGGAGCGTATCTTACAGGAACATGAACAA
ATCAAAAAGAAAACTGTCCGAGAGCGTTTGGAGCAGATCAAGAAAACAGAACTGGGTGCCAAAGCATTCA
AAGATATTGATATTGAAGACCTTGAGGAATTGGATCCAGATTTTATCATGGCTAAACAGGTTGAACAACT
GGAGAAAGAAAAGAAAGAACTTCAAGAACGCCTAAAGAATCAAGAAAAGAAGATTGACTATTTTGAAAGA
GCCAAACGTTTGGAAGAAATTCCTTTGATAAAGAGCGCTTACGAGGAACAGAGAATTAAAGACATGGATC
TGTGGGAGCAACAAGAGGAAGAAAGAATTACTACAATGCAGCTAGAACGTGAAAAGGCTCTTGAACATAA
GAATCGAATGTCACGAATGCTTGAAGACAGAGATTTATTCGTAATGCGACTCAAAGCTGCACGGCAGTCT
GTTTATGAGGAAAAACTTAAACAGTTTGAAGAGCGATTAGCAGAAGAAAGGCATAATCGATTGGAAGAAC
GGAAAAGGCAGCGTAAAGAAGAACGCAGGATAACATACTATAGAGAAAAAGAAGAGGAGGAGCAGAGAAG
GGCAGAAGAACAAATGCTAAAAGAGCGGGAAGAGAGAGAGCGCGCCGAACGAGCAAAACGCGAGGAAGAG
CTACGAGAGTATCAGGAGCGGGTGAAGAAATTAGAAGAAGTGGAAAGGAAAAAACGCCAAAGGGAGTTGG
AAATTGAAGAACGAGAACGGCGTAGAGAGGAAGAGAGAAGACTTGGCGATAGTTCCCTTTCTAGAAAGGA
CTCTCGTTGGGGAGATAGAGATTCAGAAGGCACCTGGAGAAAAGGACCTGAAGCAGATTCTGAGTGGAGA
AGAGGCCCGCCAGAGAAGGAGTGGAGACGTGGAGAAGGGCGAGATGAGGACAGGTCTCATAGAAGAGATG
AAGAGCGGCCCCGGCGTCTGGGGGATGATGAAGATAGAGAGCCCTCTCTTAGACCAGACGATGATCGGGT
TCCCCGGCGTGGCATGGATGATGACAGAGGCCCTAGACGTGGTCCTGAGGAAGATAGGTTCTCTCGTCGT
GGGGCAGACGATGACCGGCCTTCCTGGCGTAACACAGATGATGACAGGCCTCCCAGACGAATTGCCGATG
AAGACAGGGGAAACTGGCGTCATGCGGATGATGACAGACCACCTAGACGAGGACTGGATGAGGACAGAGG
AAGCTGGCGAACAGCTGATGAGGACAGAGGACCAAGACGTGGGATGGATGATGACCGGGGGCCGAGGCGA
GGAGGCGCTGATGATGAGCGATCATCCTGGCGTAATGCTGATGATGACCGGGGTCCCAGGCGAGGGTTGG
ATGATGATCGGGGTCCCAGGCGAGGCATGGATGATGACCGGGGTCCCAGGCGAGGCATGGATGATGACCG
GGGTCCCAGGCGAGGCATGGATGATGACCGGGGTCCCAGGCGAGGGTTGGATGATGATCGAGGACCTTGG
AGGAACGCCGATGATGACAGAATTCCCAGGCGTGGTGCAGAGGATGACAGGGGCCCTTGGAGAAACATGG
ATGATGATCGCCTTTCAAGACGTGCTGATGATGATCGGTTTCCCAGACGGGGTGATGACTCAAGACCTGG
TCCTTGGAGACCATTAGTCAAGCCAGGTGGATGGAGAGAGAAAGAAAAAGCCAGAGAGGAGAGCTGGGGT
CCACCTCGAGAATCAAGGCCATCAGAAGAACGTGAATGGGACAGAGAAAAAGAAAGGGACAGAGATAATC
AAGATCGGGAGGAGAATGACAAGGACCCTGAGAGAGAAAGGGACAGAGAGAGAGATGTGGATCGAGAGGA
TCGCTTCAGAAGACCTAGGGATGAAGGTGGCTGGAGAAGAGGACCAGCTGAGGAATCTTCAAGCTGGAGA
GACTCAAGTCGCCGGGACGATAGGGATAGGGATGACCGTCGCCGTGAGAGGGATGACCGGCGTGATCTAA
GAGAAAGACGAGATCTAAGAGACGACAGGGACCGAAGAGGACCTCCACTCAGATCAGAACGTGAAGAAGT
AAGTTCTTGGAGACGTGCTGATGACAGGAAAGATGACCGGGTGGAAGAGCGGGACCCTCCTCGTCGAGTT
CCTCCCCCAGCTCTTTCAAGAGACCGAGAAAGAGACCGAGACCGAGAAAGAGAAGGTGAAAAAGAGAAGG
CCTCATGGAGAGCTGAGAAAGATAGGGAATCTCTCCGTCGTACTAAAAATGAGACTGATGAAGATGGATG
GACCACAGTACGACGTTAA

Translation (1382 aa):
MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKSHLAKEG
LYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGEDTQDR
TDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQR
HHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYYNKVS
TVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVE
KQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEK
EPELQQYVPQLQNNTILRLLQQVSQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRT
LSFGSDLNYATREDAPIGPHLQSMPSEQIRNQLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKN
SRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQ
IKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFER
AKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQS
VYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREERERAERAKREEE
LREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWR
RGPPEKEWRRGEGRDEDRSHRRDEERPRRLGDDEDREPSLRPDDDRVPRRGMDDDRGPRRGPEEDRFSRR
GADDDRPSWRNTDDDRPPRRIADEDRGNWRHADDDRPPRRGLDEDRGSWRTADEDRGPRRGMDDDRGPRR
GGADDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRGPW
RNADDDRIPRRGAEDDRGPWRNMDDDRLSRRADDDRFPRRGDDSRPGPWRPLVKPGGWREKEKAREESWG
PPRESRPSEEREWDREKERDRDNQDREENDKDPERERDRERDVDREDRFRRPRDEGGWRRGPAEESSSWR
DSSRRDDRDRDDRRRERDDRRDLRERRDLRDDRDRRGPPLRSEREEVSSWRRADDRKDDRVEERDPPRRV
PPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWTTVRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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