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Report for CCDS75995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75995.1 Public Homo sapiens X PBDC1 24 110 108 CCDS HistoryNCBI Gene:51260Re-query CCDS DB by CCDS ID:75995.1Re-query CCDS DB by GeneID:51260See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373357.3 ENSP00000362455.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373357.3Link to Ensembl Protein Viewer:ENSP00000362455.3Re-query CCDS DB by Nucleotide ID:ENST00000373357Re-query CCDS DB by Protein ID:ENSP00000362455
Original member Current member NCBI NM_001300888.2 NP_001287817.1 Accepted alive Link to Nucleotide Sequence:NM_001300888.2Link to Protein Sequence:NP_001287817.1Re-query CCDS DB by Nucleotide ID:NM_001300888Re-query CCDS DB by Protein ID:NP_001287817Link to BLAST:NP_001287817.1

Chromosomal Locations for CCDS 75995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 76173139 76173168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 76173585 76173650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 76174890 76174949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 76175473 76175613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 76177616 76178017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGGCGGCCACCAGTGGAACTGATGAGCCGGTTTCCGGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTC
TCCCAGCAGAGTCGTATGGCAACGATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGC
TGAAGTCTATTACAAGCTGATTTCATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTAGATGACCAA
ATTTACTCTGAGTTCCGGAAAAATTTTGAGACCCTTAGGATAGATGTGTTGGACCCAGAAGAACTCAAGT
CAGAATCAGCCAAAGAGCCCCCAGGATACAATTCTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTAT
AACAAAGCTGTTTATATCAGTGTTCAGGACAAAGAAGGAGAGAAAGGAGTCAACAATGGAGGAGAAAAAA
GAGCTGACAGTGGAGAAGAAGAGAACACCAAGAATGGAGGAGAGAAAGGAGCTGATAGTGGAGAAGAAAA
AGAGGAAGGAATCAACAGAGAAGACAAAACTGACAAAGGAGGAGAAAAAGGGAAAGAAGCTGACAAAGAA
ATCAACAAAAGTGGTGAAAAAGCTATGTAAGGTATACAGGGAACAGCACTCTAGAAGCTATGACTCAATT
GAGACTACAAGTACCACGGTGCTACTTGCACAGACCCCTTTGGTTAAATGTAAATTCTTGTACAATTGA

Translation (232 aa):
MAATSGTDEPVSGELVSVAHALSLPAESYGNDPDIEMAWAMRAMQHAEVYYKLISSVDPQFLKLTKVDDQ
IYSEFRKNFETLRIDVLDPEELKSESAKEPPGYNSLPLKLLGTGKAITKLFISVFRTKKERKESTMEEKK
ELTVEKKRTPRMEERKELIVEKKKRKESTEKTKLTKEEKKGKKLTKKSTKVVKKLCKVYREQHSRSYDSI
ETTSTTVLLAQTPLVKCKFLYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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