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Report for CCDS75954.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75954.1 Public Homo sapiens X TCEANC 24 110 108 CCDS HistoryNCBI Gene:170082Re-query CCDS DB by CCDS ID:75954.1Re-query CCDS DB by GeneID:170082See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75954.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380600.2 ENSP00000369974.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380600.2Link to Ensembl Protein Viewer:ENSP00000369974.1Re-query CCDS DB by Nucleotide ID:ENST00000380600Re-query CCDS DB by Protein ID:ENSP00000369974
Original member Current member EBI ENST00000490617.1 ENSP00000512415.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000490617.1Link to Ensembl Protein Viewer:ENSP00000512415.1Re-query CCDS DB by Nucleotide ID:ENST00000490617Re-query CCDS DB by Protein ID:ENSP00000512415
Original member Current member EBI ENST00000696127.1 ENSP00000512420.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696127.1Link to Ensembl Protein Viewer:ENSP00000512420.1Re-query CCDS DB by Nucleotide ID:ENST00000696127Re-query CCDS DB by Protein ID:ENSP00000512420
Original member Current member EBI ENST00000696128.1 ENSP00000512421.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000696128.1Link to Ensembl Protein Viewer:ENSP00000512421.1Re-query CCDS DB by Nucleotide ID:ENST00000696128Re-query CCDS DB by Protein ID:ENSP00000512421
Original member Current member EBI ENST00000696129.1 ENSP00000512422.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696129.1Link to Ensembl Protein Viewer:ENSP00000512422.1Re-query CCDS DB by Nucleotide ID:ENST00000696129Re-query CCDS DB by Protein ID:ENSP00000512422
Original member Current member EBI ENST00000696130.1 ENSP00000512423.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696130.1Link to Ensembl Protein Viewer:ENSP00000512423.1Re-query CCDS DB by Nucleotide ID:ENST00000696130Re-query CCDS DB by Protein ID:ENSP00000512423
Original member Current member NCBI NM_001297563.2 NP_001284492.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001297563.2Link to Protein Sequence:NP_001284492.1Re-query CCDS DB by Nucleotide ID:NM_001297563Re-query CCDS DB by Protein ID:NP_001284492Link to BLAST:NP_001284492.1
Original member Current member NCBI NM_001297564.2 NP_001284493.1 Accepted alive Link to Nucleotide Sequence:NM_001297564.2Link to Protein Sequence:NP_001284493.1Re-query CCDS DB by Nucleotide ID:NM_001297564Re-query CCDS DB by Protein ID:NP_001284493Link to BLAST:NP_001284493.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284492.1 351 Q8N8B7-1 351 100% 0 0
NP_001284493.1 351 Q8N8B7-1 351 100% 0 0

Chromosomal Locations for CCDS 75954.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 13662509 13663564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGTCTGACAAGAACCAGATAGCTGCCAGAGCTTCTCTTATTGAGCAACTGATGTCCAAAAGGAATTTTG
AGGATCTTGGCAACCACCTTACTGAGCTAGAAACAATTTATGTGACTAAGGAGCATCTCCAGGAGACAGA
TGTGGTCAGAGCTGTGTACAGAGTCCTCAAAAACTGCCCCTCTGTGGCTTTGAAAAAGAAAGCCAAGTGT
TTGCTATCAAAGTGGAAAGCTGTTTATAAGCAGACTCACTCCAAAGCGAGGAACAGCCCTAAATTATTTC
CTGTGAGGGGTAATAAAGAAGAAAATTCAGGACCTTCTCATGACCCAAGTCAGAATGAGACACTGGGCAT
CTGCAGCTCGAATTCTCTGTCTTCCCAAGACGTTGCAAAACTCAGTGAAATGATTGTGCCTGAAAATAGA
GCCATTCAATTGAAACCTAAGGAAGAGCATTTTGGGGATGGTGACCCTGAATCCACTGGCAAGAGATCGA
GTGAGTTGCTGGATCCCACAACACCCATGAGAACTAAATGCATAGAGCTTCTTTACGCAGCTTTAACTAG
TTCTTCCACAGATCAACCCAAAGCTGATTTGTGGCAAAACTTTGCAAGAGAAATTGAAGAGCATGTTTTT
ACCCTTTATTCAAAGAACATCAAAAAATATAAAACTTGCATCAGAAGCAAAGTTGCCAATTTGAAGAACC
CCAGAAATTCTCATTTACAACAAAACTTGCTCTCTGGGACCACGTCTCCACGAGAATTTGCTGAAATGAC
TGTCATGGAGATGGCAAATAAGGAACTGAAGCAGTTGAGAGCCTCCTACACGGAATCTTGTATCCAGGAA
CATTACCTTCCCCAAGTAATTGATGGCACACAGACAAATAAAATAAAATGCAGACGCTGTGAGAAATACA
ATTGCAAAGTCACTGTAATTGACAGAGGAACACTTTTCCTTCCCAGCTGGGTGCGGAATTCAAACCCAGA
TGAACAAATGATGACTTACGTAATTTGTAACGAATGTGGGGAGCAGTGGTACCATAGCAAGTGGGTGTGC
TGGTAA

Translation (351 aa):
MSDKNQIAARASLIEQLMSKRNFEDLGNHLTELETIYVTKEHLQETDVVRAVYRVLKNCPSVALKKKAKC
LLSKWKAVYKQTHSKARNSPKLFPVRGNKEENSGPSHDPSQNETLGICSSNSLSSQDVAKLSEMIVPENR
AIQLKPKEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIEEHVF
TLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELKQLRASYTESCIQE
HYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQWYHSKWVC
W


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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