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Report for CCDS75910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75910.1 Public Homo sapiens 9 CIZ1 24 110 108 CCDS HistoryNCBI Gene:25792Re-query CCDS DB by CCDS ID:75910.1Re-query CCDS DB by GeneID:25792See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75910.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538431.5 ENSP00000439244.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538431.5Link to Ensembl Protein Viewer:ENSP00000439244.2Re-query CCDS DB by Nucleotide ID:ENST00000538431Re-query CCDS DB by Protein ID:ENSP00000439244
Original member Current member NCBI NM_001257975.2 NP_001244904.1 Accepted alive Link to Nucleotide Sequence:NM_001257975.2Link to Protein Sequence:NP_001244904.1Re-query CCDS DB by Nucleotide ID:NM_001257975Re-query CCDS DB by Protein ID:NP_001244904Link to BLAST:NP_001244904.1

Chromosomal Locations for CCDS 75910.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128166197 128166406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128166759 128166880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128167095 128167164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169052 128169201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169406 128169519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169623 128169700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128170020 128170107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128176351 128176475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128177566 128177763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178369 128178490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178709 128179415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180415 128180523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180721 128180814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128185547 128185776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128187863 128187934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128190329 128190444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128190688 128190862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128191855 128191939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2865 nt):
ATGTACATCCGCCAACTGCGCGCCCCCTCTCACCGCAGCCCCGCGCGGGGCCCCAGGATCGCAGGACCGC
GGCGGCCGCAGGGAGCCACCATGTTCAGCCAGCAGCAGCAGCAGCAGCTCCAGCAACAGCAGCAGCAGCT
CCAGCAGTTACAGCAGCAGCAGCTCCAGCAGCAGCAATTGCAGCAGCAGCAGTTACTGCAGCTCCAGCAG
CTGCTCCAGCAGTCCCCACCACAGGCCCCGTTGCCCATGGCTGTCAGCCGGGGGCTCCCCCCGCAGCAGC
CACAGCAGCCGCTTCTGAATCTCCAGGGCACCAACTCAGCCTCCCTCCTCAACGGCTCCATGCTGCAGAG
AGCTTTGCTTTTACAGCAGTTGCAAGGACTGGACCAGTTTGCAATGCCACCAGCCACGTATGACACTGCC
GGTCTCACCATGCCCACAGCAACACTGGGTAACCTCCGAGGCTATGGCATGGCATCCCCAGGCCTCGCAG
CCCCCAGCCTCACACCCCCACAACTGGCCACTCCAAATTTGCAACAGTTCTTTCCCCAGGCCACTCGCCA
GTCCTTGCTGGGACCTCCTCCTGTTGGGGTCCCCATGAACCCTTCCCAGTTCAACCTTTCAGGACGGAAC
CCCCAGAAACAGGCCCGGACCTCCTCCTCTACCACCCCCAATCGAAAGGATTCTTCTTCTCAGACAATGC
CTGTGGAAGACAAGTCAGACCCCCCAGAGGGGTCTGAGGAAGCCGCAGAGCCCCGGATGGACACACCAGA
AGACCAAGATTTACCGCCCTGCCCAGAGGACATCGCCAAGGAAAAACGCACTCCAGCACCTGAGCCTGAG
CCTTGTGAGGCGTCCGAGCTGCCAGCAAAGAGATTGAGGAGCTCAGAAGAGCCCACAGAGAAGGAACCTC
CAGGGCAGTTACAGGTGAAGGCCCAGCCGCAGGCCCGGATGACAGTACCGAAACAGACACAGACACCAGA
CCTGCTGCCTGAGGCCCTGGAAGCCCAAGTGCTGCCACGATTCCAGCCACGGGTCCTGCAGGTCCAGGCC
CAGGTGCAGTCACAGACTCAGCCGCGGATACCATCCACAGACACCCAGGTGCAGCCAAAGCTGCAGAAGC
AGGCGCAAACACAGACCTCTCCAGAGCACTTAGTGCTGCAACAGAAGCAGGTGCAGCCACAGCTGCAGCA
GGAGGCAGAGCCACAGAAGCAGGTGCAGCCACAGGTACAGCCACAGGCACATTCACAGGGCCCAAGGCAG
GTGCAGCTGCAGCAGGAGGCAGAGCCGCTGAAGCAGGTGCAGCCACAGGTGCAGCCCCAGGCACATTCAC
AGCCCCCAAGGCAGGTGCAGCTGCAGCTGCAGAAGCAGGTCCAGACACAGACATATCCACAGGTCCACAC
ACAGGCACAGCCAAGCGTCCAGCCACAGGAGCATCCTCCAGCGCAGGTGTCAGTACAGCCACCAGAGCAG
ACCCATGAGCAGCCTCACACCCAGCCGCAGGTGTCGTTGCTGGCTCCAGAGCAAACACCAGTTGTGGTTC
ATGTCTGCGGGCTGGAGATGCCACCTGATGCAGTAGAAGCTGGTGGAGGCATGGAAAAGACCTTGCCAGA
GCCTGTGGGCACCCAAGTCAGCATGGAAGAGATTCAGAATGAGTCGGCCTGTGGCCTAGATGTGGGAGAA
TGTGAAAACAGAGCGAGAGAGATGCCAGGGGTATGGGGCGCCGGGGGCTCCCTGAAGGTCACCATTCTGC
AGAGCAGTGACAGCCGGGCCTTTAGCACTGTACCCCTGACACCTGTCCCCCGCCCCAGTGACTCCGTCTC
CTCCACCCCTGCGGCTACCAGCACTCCCTCTAAGCAGGCCCTCCAGTTCTTCTGCTACATCTGCAAGGCC
AGCTGCTCCAGCCAGCAGGAGTTCCAGGACCACATGTCGGAGCCTCAGCACCAGCAGCGGCTAGGGGAGA
TCCAGCACATGAGCCAAGCCTGCCTCCTGTCCCTGCTGCCCGTGCCCCGGGACGTCCTGGAGACAGAGGA
TGAGGAGCCTCCACCAAGGCGCTGGTGCAACACCTGCCAGCTCTACTACATGGGGGACCTGATCCAACAC
CGCAGGACACAGGACCACAAGCCACCCACACCACGAAGAGATGTGTTTGCCCACGTTCCAGTGCAGGGGT
GGAGCACAGCCCGGCTTGTTACAGATATGATTGCCAAACAATCCTTGCGACCCTTCTGCACCGTTTGCAA
CCGCTACTTCAAAACCCCTCGCAAGTTTGTGGAGCACGTGAAGTCCCAGGGGCATAAGGACAAAGCCAAG
GAGCTGAAGTCGCTTGAGAAAGAAATTGCTGGCCAAGATGAGGACCACTTCATTACAGTGGACGCTGTGG
GTTGCTTCGAGGGTGATGAAGAAGAGGAAGAGGATGATGAGGATGAAGAAGAGATCGAGGTTGAGGAGGA
ACTCTGCAAGCAGGTGAGGTCCAGAGATATATCCAGAGAGGAGTGGAAGGGCTCGGAGACCTACAGCCCC
AATACTGCATATGGTGTGGACTTCCTGGTGCCCGTGATGGGCTATATCTGCCGCATCTGCCACAAGTTCT
ATCACAGCAACTCAGGGGCACAGCTCTCCCACTGCAAGTCCCTGGGCCACTTTGAGAACCTGCAGAAATA
CAAGGCGGCCAAGAACCCCAGCCCCACCACCCGACCTGTGAGCCGCCGGTGCGCAATCAACGCCCGGAAC
GCTTTGACAGCCCTGTTCACCTCCAGCGGCCGCCCACCCTCCCAGCCCAACACCCAGGACAAAACACCCA
GCAAGGTGACGGCTCGACCCTCCCAGCCCCCACTACCTCGGCGCTCAACCCGCCTCAAAACCTGA

Translation (954 aa):
MYIRQLRAPSHRSPARGPRIAGPRRPQGATMFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQ
LLQQSPPQAPLPMAVSRGLPPQQPQQPLLNLQGTNSASLLNGSMLQRALLLQQLQGLDQFAMPPATYDTA
GLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNPSQFNLSGRN
PQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKEKRTPAPEPE
PCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRFQPRVLQVQA
QVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVQPQAHSQGPRQ
VQLQQEAEPLKQVQPQVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPAQVSVQPPEQ
THEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNESACGLDVGE
CENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQALQFFCYICKA
SCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQLYYMGDLIQH
RRTQDHKPPTPRRDVFAHVPVQGWSTARLVTDMIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAK
ELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSETYSP
NTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINARN
ALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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