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Report for CCDS75908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75908.1 Public Homo sapiens 9 ST6GALNAC6 24 110 108 CCDS HistoryNCBI Gene:30815Re-query CCDS DB by CCDS ID:75908.1Re-query CCDS DB by GeneID:30815See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75908.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542456.5 ENSP00000438109.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542456.5Link to Ensembl Protein Viewer:ENSP00000438109.2Re-query CCDS DB by Nucleotide ID:ENST00000542456Re-query CCDS DB by Protein ID:ENSP00000438109
Original member Current member NCBI NM_001287003.2 NP_001273932.1 Accepted alive Link to Nucleotide Sequence:NM_001287003.2Link to Protein Sequence:NP_001273932.1Re-query CCDS DB by Nucleotide ID:NM_001287003Re-query CCDS DB by Protein ID:NP_001273932Link to BLAST:NP_001273932.1
Original member Current member NCBI NM_001400832.1 NP_001387761.1 Accepted alive Link to Nucleotide Sequence:NM_001400832.1Link to Protein Sequence:NP_001387761.1Re-query CCDS DB by Nucleotide ID:NM_001400832Re-query CCDS DB by Protein ID:NP_001387761Link to BLAST:NP_001387761.1

Chromosomal Locations for CCDS 75908.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127887526 127887591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127894512 127894691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127896242 127896256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (261 nt):
ATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCC
TCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCGCCGACCTGT
CAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGGGAGAAGTCTCATTC
GTGGTTGAGCACAGGCTGGTTTACCATGGTGATCGCGGTGGAGTTGTGTGA

Translation (86 aa):
MSSNKEQRSAVFVILFALITILILYSSNSANEVFHYGSLRGRSRRPVNLKKWSITDGYVPILGNKGEVSF
VVEHRLVYHGDRGGVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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