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Report for CCDS75859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75859.1 Public Homo sapiens 9 FAM120A 24 110 108 CCDS HistoryNCBI Gene:23196Re-query CCDS DB by CCDS ID:75859.1Re-query CCDS DB by GeneID:23196See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75859.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375389.7 ENSP00000364538.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375389.7Link to Ensembl Protein Viewer:ENSP00000364538.3Re-query CCDS DB by Nucleotide ID:ENST00000375389Re-query CCDS DB by Protein ID:ENSP00000364538
Original member Current member NCBI NM_001286724.2 NP_001273653.1 Accepted alive Link to Nucleotide Sequence:NM_001286724.2Link to Protein Sequence:NP_001273653.1Re-query CCDS DB by Nucleotide ID:NM_001286724Re-query CCDS DB by Protein ID:NP_001273653Link to BLAST:NP_001273653.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273653.1 628 Q9NZB2-2 628 100% 0 0

Chromosomal Locations for CCDS 75859.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 93451916 93452389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93471141 93471387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93476256 93476338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93497471 93497599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93498790 93498886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93515667 93515767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93515983 93516269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93527155 93527242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93529353 93529733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1887 nt):
ATGGGCGTGCAGGGCTTCCAGGACTACATCGAGAAGCACTGCCCGAGCGCCGTGGTGCCGGTGGAGCTGC
AGAAGCTGGCCCGGGGCAGCCTGGTGGGCGGCGGGCGGCAGCGGCCCCCGCAGACCCCGCTGCGCCTGCT
GGTGGACGCCGACAACTGCCTGCACCGCCTCTACGGCGGCTTCTACACCGACTGGGTCAGCGGCGGCCAG
TGGAACCACATGCTTGGCTACCTGGCGGCGCTGGCCAAGGCCTGCTTCGGCGGCAACATCGAGCTCTTCG
TCTTCTTCAACGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCA
GACGGCACAGCAGATCGTCAGCCATGTCCAGAACAAGGGCACCCCGCCGCCAAAGGTCTGGTTCCTGCCG
CCCGTCTGCATGGCCCACTGCATCCGCCTGGCGCTCATCCGCTTCCACGTCAAGGTTGCACAGAGCATTG
AGGATCACCATCAGGAAGTGATTGGTTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTTGCGTATGACTC
TGATTATGCACTGTGCAACATCCCCTACTATTTCAGTGCCCATGCCCTAAAACTGAGCCGGAACGGGAAA
AGTCTCACCACAAGCCAATATCTGATGCATGAAGTTGCCAAGCAACTGGACCTGAATCCAAATCGTTTTC
CTATTTTTGCTGCTCTCTTAGGAAATCACATTCTGCCTGATGAAGATCTGGCTTCCTTTCACTGGAGTTT
ACTTGGTCCAGAACATCCACTAGCCTCACTAAAGGTCCGGGCCCACCAGCTGGTCTTGCCACCTTGCGAC
GTAGTGATCAAAGCCGTTGCTGACTATGTACGCAACATTCAGGACACCTCTGACTTGGATGCCATAGCTA
AAGATGTTTTCCAGCATTCACAGTCTAGAACAGATGACAAAGTTATTCGATTTAAGAGAGCAATTGGATA
TTATTCAGCGACTAGTAAGCCTATGTCATTTCATCCACCACATTACTTAGCAGCCAGACCCGGTCCGTTT
GGAATGCCTGGGATGGTGCCGCCGCATGTTCCTCCTCAGATGCTCAACATTCCGCAGACCTCTCTGCAAG
CAAAGCCCGTGGCCCCACAGGTGCCCAGCCCAGGGGGCGCCCCGGGCCAGGGTCCATACCCGTACAGCCT
CTCTGAGCCAGCACCTCTCACTTTGGACACGAGCGGGAAGAATCTGACGGAGCAGAACAGCTACAGCAAC
ATTCCTCACGAAGGGAAGCACACGCCGCTGTATGAGCGGTCCTCGCCCATCAACCCGGCCCAGAGCGGCA
GCCCCAACCACGTGGATTCCGCCTACTTCCCTGGCTCTTCTACATCGTCATCTTCCGACAACGACGAGGG
CAGCGGAGGGGCGACAAACCATATCAGCGGGAACAAGATTGGCTGGGAGAAGACGGGAAGCCACTCAGAG
CCTCAGGCACGAGGAGACCCAGGAGACCAAACAAAGGCAGAAGGCTCGTCCACTGCCTCTTCAGGAAGCC
AACTAGCCGAAGGCAAGGGAAGCCAGATGGGCACTGTCCAGCCAATCCCGTGCCTCCTGTCGATGCCCAC
CAGGAACCACATGGACATCACCACACCTCCCCTGCCCCCCGTCGCACCTGAGGTGCTGAGAGTGGCCGAG
CACAGGCACAAGAAGGGGCTGATGTACCCCTACATCTTCCATGTCCTGACGAAGGTATTATCAAAGGGGC
CCTGGAGTGGCTTCTGTTATTTGATGAGTGGCCATTCCTATGGGTGTTTTGTCCTTTTGTCCTTTTTTGA
ACCATTTTTCTGTCTTACTAATCTACTTGAAACAAAGTTCACTTTCCCCTTTCTAAACATTGAATGA

Translation (628 aa):
MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVDADNCLHRLYGGFYTDWVSGGQ
WNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLP
PVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGK
SLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCD
VVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMSFHPPHYLAARPGPF
GMPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSN
IPHEGKHTPLYERSSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNKIGWEKTGSHSE
PQARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAE
HRHKKGLMYPYIFHVLTKVLSKGPWSGFCYLMSGHSYGCFVLLSFFEPFFCLTNLLETKFTFPFLNIE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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