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Report for CCDS75414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75414.1 Public Homo sapiens 6 ZSCAN26 24 110 108 CCDS HistoryNCBI Gene:7741Re-query CCDS DB by CCDS ID:75414.1Re-query CCDS DB by GeneID:7741See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614088.1 ENSP00000479314.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614088.1Link to Ensembl Protein Viewer:ENSP00000479314.1Re-query CCDS DB by Nucleotide ID:ENST00000614088Re-query CCDS DB by Protein ID:ENSP00000479314
Original member Current member EBI ENST00000316606.10 ENSP00000484931.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316606.10Link to Ensembl Protein Viewer:ENSP00000484931.1Re-query CCDS DB by Nucleotide ID:ENST00000316606Re-query CCDS DB by Protein ID:ENSP00000484931
Original member Current member NCBI NM_001287421.2 NP_001274350.1 Accepted alive Link to Nucleotide Sequence:NM_001287421.2Link to Protein Sequence:NP_001274350.1Re-query CCDS DB by Nucleotide ID:NM_001287421Re-query CCDS DB by Protein ID:NP_001274350Link to BLAST:NP_001274350.1
Original member Current member NCBI NM_152736.6 NP_689949.3 Accepted alive Link to Nucleotide Sequence:NM_152736.6Link to Protein Sequence:NP_689949.3Re-query CCDS DB by Nucleotide ID:NM_152736Re-query CCDS DB by Protein ID:NP_689949Link to BLAST:NP_689949.3

Chromosomal Locations for CCDS 75414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 28271920 28271934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 28272670 28272787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 28276195 28277096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGGCAACAGCATTGGACCCAGACCAGCCAAAGAAACAAAAAATACTTGTGGAGGAGATGGCCCCTCTGA
AA
GGAGTACAGGAACAGCAGGTTCGGCATGAGTGTGAAGTTACAAAGCCTGAGAAAGAGAAGGGTGAGGA
G
ACAAGGATTGAGAATGGGAAGCTTATTGTAGTAACAGACTCTTGTGGAAGAGTAGAGTCATCTGGGAAA
ATA
TCTGAACCCATGGAGGCTCATAATGAGGGCTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGA
AG
ATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAG
T
ACACACACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAA
GTC
CTCTCTAGAGAGAAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTTTCAGAGGAGTTCACACCTCG
TC
AGACATCAGAAAATCCATCTTGGTGAGAAGCCTTATCAGTGCAATGAGTGTGGCAAAGTCTTTAGCCA
G
AATGCAGGCCTTTTGGAACATCTCAGAATTCATACTGGAGAGAAACCTTATCTATGTATCCATTGTGGA
AAA
AATTTTAGGCGCAGCTCTCACCTTAATCGACATCAGAGAATTCACAGTCAGGAGGAGCCCTGTGAGT
GC
AAGGAGTGTGGAAAAACCTTTAGTCAGGCCTTACTCCTCACCCACCATCAGAGAATCCATAGTCACTC
C
AAAAGCCATCAATGTAACGAGTGTGGAAAAGCTTTCAGTTTGACCTCAGACCTTATTCGACACCACAGA
ATT
CATACTGGAGAAAAACCTTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACTAAACTCACACCTTG
CT
CAGCATGTAAGAATCCACAATGAAGAAAAACCCTATCAGTGTAGTGAATGTGGAGAAGCCTTCAGGCA
A
AGGTCAGGTCTTTTTCAACATCAGAGATATCACCACAAAGACAAACTGGCTTGA


Translation (344 aa):
MATALDPDQPKKQKILVEEMAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCGRVESSGK
I
SEPMEAHNEGSNLERHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTGKKLCESDVCQSSSLTGHKK
V
LSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCNECGKVFSQNAGLLEHLRIHTGEKPYLCIHCG
K
NFRRSSHLNRHQRIHSQEEPCECKECGKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHR
I
HTGEKPFKCNICQKAFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser