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Report for CCDS75410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75410.1 Public Homo sapiens 6 RIPOR2 24 110 108 CCDS HistoryNCBI Gene:9750Re-query CCDS DB by CCDS ID:75410.1Re-query CCDS DB by GeneID:9750See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510784.8 ENSP00000441305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000510784.8Link to Ensembl Protein Viewer:ENSP00000441305.1Re-query CCDS DB by Nucleotide ID:ENST00000510784Re-query CCDS DB by Protein ID:ENSP00000441305
Original member Current member NCBI NM_001286446.3 NP_001273375.1 Accepted alive Link to Nucleotide Sequence:NM_001286446.3Link to Protein Sequence:NP_001273375.1Re-query CCDS DB by Nucleotide ID:NM_001286446Re-query CCDS DB by Protein ID:NP_001273375Link to BLAST:NP_001273375.1

Chromosomal Locations for CCDS 75410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24840704 24840775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24842862 24843554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24848025 24848154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24849802 24849950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24850597 24850722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24852575 24852618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24860973 24861036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24865301 24865450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24869094 24869147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24870866 24870889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24872881 24872959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24873644 24873799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 24875691 24875817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 25041851 25041926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGTGTTACCTTCGCGATTACACTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGCCAGC
TCAACCGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCC
CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAAC
TCCTTCATTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCC
ACAAAAACAACAATCCCCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAA
TGGACTTGATGAATATCTGGAGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATG
AAAAGAAACTCTCGCCTGGGTGTACTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGA
GACGCCTGGAGTTTCATATAAGTAAGGTAGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCA
GGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTG
ACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAATATGTGCACCATTGAAGTGGAGCTAGAGAATC
TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAATA
TGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGGCAAGCAG
AGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTCATCTCCATCAAGGTCACGGAGC
TCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCG
ACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGGAAATCACCTGGTAT
CCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAA
TGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAATCTACC
TGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTG
CCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTA
CCATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTC
AGCATCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAG
GAGCCCAGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGC
ACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCC
TGTGGAACTGGACACTTCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTG
CCAATGGCCACAGACAGGCTGCTCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTC
TAGATGGAAGCTTAGAGGATGCTTTTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAA
AGAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTGGATGATATTCTAAAAGATGCTAAACACCTTGAC
GATCAGAAACTAAATGGTGCTGCCTCTTGGACGGAGATCACTGAGGGTGAATGA

Translation (647 aa):
MVLPSRLHWIRNRPWRDRIRRRQLNRLPTRLPEIMLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCN
SFIENSSALKKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLKDM
KRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAFATSPASKAARESL
TEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQYEIFMKYGRQRWKLKGKIEVNGKQ
SWDGEETVFLPLIVGFISIKVTELKGLATHILVGSVTCETKELFAARPQVVAVDINDLGTIKLNLEITWY
PFDVEDMTASSGAGNKAAALQRRMSMYSQGTPETPTFKDHSFFSNLPDDIFENGKAAEEKMPLSLSFSDL
PNGDCALTSHSTGSPSNSTNPEITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPE
EPRKPASAPSEACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQLVKRLTSAEV
PMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQDLNQEVMNLDDILKDAKHLD
DQKLNGAASWTEITEGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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