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Report for CCDS75394.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75394.1 Public Homo sapiens 6 BLOC1S5 24 110 108 CCDS HistoryNCBI Gene:63915Re-query CCDS DB by CCDS ID:75394.1Re-query CCDS DB by GeneID:63915See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75394.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543936.7 ENSP00000445215.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543936.7Link to Ensembl Protein Viewer:ENSP00000445215.2Re-query CCDS DB by Nucleotide ID:ENST00000543936Re-query CCDS DB by Protein ID:ENSP00000445215
Original member Current member NCBI NM_001199323.1 NP_001186252.1 Accepted alive Link to Nucleotide Sequence:NM_001199323.1Link to Protein Sequence:NP_001186252.1Re-query CCDS DB by Nucleotide ID:NM_001199323Re-query CCDS DB by Protein ID:NP_001186252Link to BLAST:NP_001186252.1

Chromosomal Locations for CCDS 75394.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 8015810 8015828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 8026367 8026425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 8062534 8062616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 8064265 8064376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGAGTGGCGGAGGGACAGAGACCCCTGTGGGTTGTGAGGCCGCCCCGGGCGGTGGCAGCAAGAAGAGGG
ACTCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATCAAGGATCTTGGAGAAATTCATTCAAGGCTTTT
GGATCACAGACCAGTTATTCAAGGTGAAACTCGTTATTTTGTAAAAGAATTTGAATGCAAGCAGCTAATG
ACTCAGTCTGTAGACTCCAACAGAGGGAACAGGAACGAAAAAAGATTCATAGTGACCACTTAG

Translation (90 aa):
MSGGGTETPVGCEAAPGGGSKKRDSLGTAGSAHLIIKDLGEIHSRLLDHRPVIQGETRYFVKEFECKQLM
TQSVDSNRGNRNEKRFIVTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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