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Report for CCDS75373.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75373.1 Public Homo sapiens 5 KIAA1191 24 110 108 CCDS HistoryNCBI Gene:57179Re-query CCDS DB by CCDS ID:75373.1Re-query CCDS DB by GeneID:57179See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75373.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620366.4 ENSP00000477518.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620366.4Link to Ensembl Protein Viewer:ENSP00000477518.1Re-query CCDS DB by Nucleotide ID:ENST00000620366Re-query CCDS DB by Protein ID:ENSP00000477518
Original member Current member NCBI NM_001287335.2 NP_001274264.1 Accepted alive Link to Nucleotide Sequence:NM_001287335.2Link to Protein Sequence:NP_001274264.1Re-query CCDS DB by Nucleotide ID:NM_001287335Re-query CCDS DB by Protein ID:NP_001274264Link to BLAST:NP_001274264.1

Chromosomal Locations for CCDS 75373.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 176347600 176347808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176347921 176348063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176348250 176348356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176350613 176350737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 176352622 176352712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGACCCTGTCATCAGCCATTGACAGTGTGGACAAGGTCCCAGTGGTGAAGGCTAAAGCTACCCATGTCA
TCATGAATTCTCTGATCACAAAACAGACCCAGGAAAGCATTCAGCATTTTGAGCGACAGGCAGGGCTGAG
AGATGCTGGCTACACACCCCACAAGGGCCTCACCACCGAGGAGACCAAGTACCTTCGAGTGGCCGAAGCA
CTCCACAAACTAAAGTTACAGAGTGGAGAGGTAACAAAAGAAGAGAGGCAGCCTGCATCAGCCCAGTCCA
CCCCAAGCACCACTCCGCACTCTTCACCTAAGCAGAGGCCCAGGGGCTGGTTCACTTCTGGTTCTTCCAC
AGCCTTACCTGGCCCAAATCCTAGCACCATGGACTCTGGAAGTGGGGATAAGGACAGAAACTTGTCAGAT
AAGTGGAGCCTCTTTGGACCGAGATCCCTTCAGAAGTACGATTCTGGAAGTTTTGCCACCCAGGCCTACC
GAGGAGCCCAGAAGCCCTCTCCATTGGAACTGATACGTGCCCAGGCCAACCGAATGGCTGAAGATCCAGC
AGCCTTGAAGCCCCCCAAGATGGACATCCCAGTGATGGAAGGAAAGAAACAGCCACCACGGGCCCATAAC
CTCAAACCCCGTGACCTGAATGTGCTCACACCCACTGGCTTCTAG

Translation (224 aa):
MTLSSAIDSVDKVPVVKAKATHVIMNSLITKQTQESIQHFERQAGLRDAGYTPHKGLTTEETKYLRVAEA
LHKLKLQSGEVTKEERQPASAQSTPSTTPHSSPKQRPRGWFTSGSSTALPGPNPSTMDSGSGDKDRNLSD
KWSLFGPRSLQKYDSGSFATQAYRGAQKPSPLELIRAQANRMAEDPAALKPPKMDIPVMEGKKQPPRAHN
LKPRDLNVLTPTGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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