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Report for CCDS75301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75301.1 Public Homo sapiens 5 ZCCHC10 24 110 108 CCDS HistoryNCBI Gene:54819Re-query CCDS DB by CCDS ID:75301.1Re-query CCDS DB by GeneID:54819See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000509437.6 ENSP00000423276.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000509437.6Link to Ensembl Protein Viewer:ENSP00000423276.1Re-query CCDS DB by Nucleotide ID:ENST00000509437Re-query CCDS DB by Protein ID:ENSP00000423276
Original member Current member NCBI NM_001300816.3 NP_001287745.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001300816.3Link to Protein Sequence:NP_001287745.1Re-query CCDS DB by Nucleotide ID:NM_001300816Re-query CCDS DB by Protein ID:NP_001287745Link to BLAST:NP_001287745.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287745.1 192 Q8TBK6-1 192 100% 0 0

Chromosomal Locations for CCDS 75301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132998583 132998850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133000132 133000173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133006759 133006920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133022841 133022906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 133026497 133026537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGCGACTCCCATGCATCGGCTAATAGCCCGGAGACAAGCATTCGACACAGAGTTGCAGCCTGTCAAGA
CCTTTTGGATCCTGATTCAGCCATCCATCGTTATTAGTGAAGCAAATAAGCAACATGTAAGATGTCAGAA
ATGCTTGGAATTTGGACATTGGACTTATGAATGCACAGGAAAAAGAAAATACCTACATAGGCCCTCAAGG
ACAGCAGAACTAAAGAAAGCTTTAAAAGAAAAAGAAAACAGATTATTATTGCAACAAAGCATTGGAGAAA
CCAATGTAGAAAGAAAGGCCAAGAAAAAAAGGTCTAAGAGTGTAACCAGTTCCAGTAGCAGTAGCAGTGA
CAGTTCTGCCAGTGATTCTTCATCAGAGAGTGAAGAAACATCTACCTCTTCCTCCTCAGAGGACAGTGAC
ACTGATGAAAGCTCCTCTAGTTCCTCATCCTCAGCCTCCTCCACAACCTCTTCCTCCTCCTCTGATTCAG
ACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAA
GAAGAAGAAAAAGAAATAG

Translation (192 aa):
MATPMHRLIARRQAFDTELQPVKTFWILIQPSIVISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSR
TAELKKALKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSEDSD
TDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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