NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS75163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75163.1 Public Homo sapiens 4 KLHL8 24 110 108 CCDS HistoryNCBI Gene:57563Re-query CCDS DB by CCDS ID:75163.1Re-query CCDS DB by GeneID:57563See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75163.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425278.6 ENSP00000408854.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425278.6Link to Ensembl Protein Viewer:ENSP00000408854.2Re-query CCDS DB by Nucleotide ID:ENST00000425278Re-query CCDS DB by Protein ID:ENSP00000408854
Original member Current member NCBI NM_001292007.2 NP_001278936.1 Accepted alive Link to Nucleotide Sequence:NM_001292007.2Link to Protein Sequence:NP_001278936.1Re-query CCDS DB by Nucleotide ID:NM_001292007Re-query CCDS DB by Protein ID:NP_001278936Link to BLAST:NP_001278936.1

Chromosomal Locations for CCDS 75163.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 87163519 87163642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87163878 87164079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87170079 87170238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87170447 87170615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87176757 87176868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87178477 87178620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87183203 87183389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 87195324 87195539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1314 nt):
ATGGCTTCAGATTCTATGAGTAGTAAACAAGCTAGGAATCACATTACAAAGGGGAAAAGGCAACAACAGC
ACCAGCAAATAAAGAACAGATCCTCAATTAGTGATGGTGATGGAGAAGATTCCTTTATTTTTGAAGCAAA
TGAAGCTTGGAAAGATTTTCATGGTTCTCTTCTTCGATTTTATGAAAATGGAGAACTCTGTGATGTCACA
CTCAAGGTTCGCCTGCCATTGTTGCCGGTTGATTTTCTTATGGGTGTTGTGGCAAAAGAACAGATTGTCA
AGCAAAATCTAAAATGTAGAGATTTACTGGATGAAGCAAGAAATTACCACCTTCACTTGAGTAGCAGAGC
AGTACCTGACTTTGAATACTCCATTCGGACTACCCCAAGGAAGCATACTGCTGGTGTGCTGTTTTGTGTA
GGTGGTCGAGGTGGATCTGGTGACCCCTTTCGCAGTATTGAATGCTATTCTATCAACAAAAACAGTTGGT
TCTTTGGACCAGAAATGAATAGTCGAAGGCGACATGTGGGTGTAATCTCTGTGGAAGGTAAAGTGTATGC
AGTAGGTGGACATGATGGAAATGAACATTTAGGGAGTATGGAGATGTTTGATCCTCTCACTAATAAATGG
ATGATGAAGGCATCAATGAACACAAAGAGGCGAGGAATTGCCTTGGCTTCCTTAGGAGGCCCAATTTATG
CAATTGGAGGGTTAGATGACAATACTTGCTTCAATGATGTGGAGAGATATGACATAGAATCTGATCAGTG
GAGTACAGTGGCACCAATGAATACTCCCCGTGGAGGAGTTGGCTCTGTTGCTCTAGTAAACCATGTTTAT
GCAGTAGGTGGCAATGATGGAATGGCTTCTTTATCTAGCGTGGAGAGATATGATCCACATCTGGATAAGT
GGATAGAAGTTAAAGAAATGGGTCAGCGAAGAGCAGGCAATGGAGTTAGCAAGCTTCATGGTTGCTTATA
CGTAGTTGGTGGTTTTGATGATAATTCTCCTCTGAGTTCAGTTGAGCGGTATGACCCCCGAAGCAACAAG
TGGGATTATGTGGCAGCACTTACTACTCCCAGAGGTGGAGTGGGAATCGCAACAGTGATGGGCAAAATCT
TTGCAGTTGGTGGTCATAATGGCAATGCATACTTAAATACAGTAGAAGCGTTTGATCCAGTGCTGAATAG
GTGGGAGCTTGTTGGATCTGTGTCTCACTGCAGAGCTGGAGCAGGAGTAGCTGTGTGTTCCTGTTTAACT
AGCCAAATTCGAGATGTAGGTCATGGATCCAATAATGTGGTTGACTGTATGTGA

Translation (437 aa):
MASDSMSSKQARNHITKGKRQQQHQQIKNRSSISDGDGEDSFIFEANEAWKDFHGSLLRFYENGELCDVT
LKVRLPLLPVDFLMGVVAKEQIVKQNLKCRDLLDEARNYHLHLSSRAVPDFEYSIRTTPRKHTAGVLFCV
GGRGGSGDPFRSIECYSINKNSWFFGPEMNSRRRHVGVISVEGKVYAVGGHDGNEHLGSMEMFDPLTNKW
MMKASMNTKRRGIALASLGGPIYAIGGLDDNTCFNDVERYDIESDQWSTVAPMNTPRGGVGSVALVNHVY
AVGGNDGMASLSSVERYDPHLDKWIEVKEMGQRRAGNGVSKLHGCLYVVGGFDDNSPLSSVERYDPRSNK
WDYVAALTTPRGGVGIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNRWELVGSVSHCRAGAGVAVCSCLT
SQIRDVGHGSNNVVDCM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH