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Report for CCDS75158.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75158.1 Public Homo sapiens 4 HELQ 24 110 108 CCDS HistoryNCBI Gene:113510Re-query CCDS DB by CCDS ID:75158.1Re-query CCDS DB by GeneID:113510See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75158.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510985.1 ENSP00000424539.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000510985.1Link to Ensembl Protein Viewer:ENSP00000424539.1Re-query CCDS DB by Nucleotide ID:ENST00000510985Re-query CCDS DB by Protein ID:ENSP00000424539
Original member Current member NCBI NM_001297755.2 NP_001284684.2 Accepted alive Link to Nucleotide Sequence:NM_001297755.2Link to Protein Sequence:NP_001284684.2Re-query CCDS DB by Nucleotide ID:NM_001297755Re-query CCDS DB by Protein ID:NP_001284684Link to BLAST:NP_001284684.2

Chromosomal Locations for CCDS 75158.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 83407453 83407560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83416731 83416865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83418093 83418206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83421563 83421736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83425994 83426092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83427563 83427720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83429524 83429746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83431664 83431768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83432126 83432267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83436858 83437097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83439863 83440008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83441305 83441403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83443517 83443614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83446014 83446086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83448783 83448961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83453231 83453945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83455397 83455693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3105 nt):
ATGGATGAATGTGGTTCCCGCATCCGCCGGCGGGTGTCTCTCCCCAAAAGGAACCGTCCAAGCTTGGGGT
GTATTTTTGGCGCTCCCACCGCGGCCGAGCTCGTGCCCGGAGATGAGGGGAAAGAGGAGGAGGAAATGGT
GGCTGAGAACAGGAGGCGGAAAACCGCGGGCGTACTGCCGGTTGAGGTACAGCCCCTTCTACTCTCAGAT
TCCCCGGAATGTCTCGTCCTTGGAGGTGGTGATACAAACCCGGACCTCCTACGTCACATGCCCACTGACA
GAGGGGTGGGAGACCAGCCTAATGACAGTGAAGTGGACATGTTTGGTGACTATGATAGCTTTACTGAAAA
CTCCTTTATAGCTCAAGTTGACGACCTGGAACAAAAATATATGCAACTCCCTGAACATAAGAAACATGCT
ACAGACTTTGCCACTGAAAATCTTTGCTCGGAAAGTATCAAAAACAAACTCAGCATTACTACCATAGGCA
ACCTTACTGAATTACAAACTGATAAGCACACAGAGAACCAGAGTGGATATGAAGGTGTCACTATTGAACC
TGGAGCTGATCTTTTGTATGATGTACCTTCCTCACAGGCTATATACTTTGAAAATTTGCAGAACTCTTCA
AATGATTTGGGTGATCATTCTATGAAAGAAAGGGATTGGAAGTCATCCTCTCACAACACTGTGAATGAGG
AACTGCCCCATAATTGCATAGAGCAACCCCAGCAAAATGATGAGTCCTCTTCCAAAGTCAGAACTAGTTC
AGATATGAACAGGAGAAAAAGTATTAAAGATCATCTAAAAAATGCCATGACTGGAAATGCGAAGGCCCAG
ACACCAATATTTTCTAGAAGTAAACAGCTCAAAGACACTCTCCTATCTGAGGAAATTAATGTTGCTAAGA
AAACAGTTGAGTCATCATCAAATGACCTTGGTCCTTTTTATTCATTACCCAGCAAAGTGAGAGACCTTTA
TGCCCAATTCAAGGGAATTGAAAAATTATATGAATGGCAACATACTTGTTTAACATTGAATTCTGTGCAA
GAAAGAAAAAATTTAATATATTCCTTGCCAACAAGTGGTGGAAAAACCCTCGTGGCTGAGATTTTAATGC
TGCAAGAACTGCTTTGCTGTCGGAAAGATGTTTTAATGATTCTTCCATATGTGGCAATTGTCCAAGAAAA
GTTGCACATGATTGGTGAAGGAAGCCGTGGAGCTACACTGGAAATGACCCTAGCAAAAATCCTCTACACT
AGCAAAACGACTCAAATTATTGGTATGAGTGCAACATTAAACAATGTTGAAGACCTACAAAAGTTTCTTC
AAGCAGAATATTATACCAGTCAATTTAGACCAGTTGAGTTAAAAGAATATCTGAAAATAAATGATACAAT
ATATGAAGTTGACAGCAAAGCTGAGAATGGCATGACTTTTTCACGTCTTCTTAATTATAAGTATTCTGAT
ACCCTAAAAAAGATGGATCCTGATCACTTGGTAGCATTGGTGACAGAAGTTATTCCCAATTATTCCTGCT
TAGTTTTTTGTCCTAGTAAGAAGAACTGTGAAAATGTAGCAGAAATGATATGCAAATTTTTAAGCAAGGA
ATATCTGAAACATAAGGAGAAAGAAAAATGTGAGGTGATTAAGAACTTGAAGAATATTGGCAATGGCAAC
CTGTGTCCTGTTTTAAAGCGCACTATCCCATTTGGAGTTGCCTATCACCACAGTGGCTTAACAAGTGATG
AAAGGAAACTCTTGGAGGAGGCCTACTCCACAGGAGTGCTCTGTCTTTTTACCTGCACATCTACCCTAGC
GGCAGGTGTCAACCTACCAGCTCGAAGAGTTATTTTAAGAGCTCCCTATGTTGCTAAGGAATTTTTAAAG
AGGAATCAATATAAACAGATGATTGGCAGAGCTGGTCGTGCTGGAATAGATACTATTGGGGAGAGTATCC
TCATATTGCAAGAAAAAGACAAACAACAGGTATTGGAGTTAATAACTAAACCATTGGAAAACTGTTACAG
CCATCTTGTTCAGGAATTCACCAAGGGAATCCAAACATTATTTCTCTCTTTGATTGGTTTGAAGATTGCA
ACGAATCTTGATGACATCTATCATTTCATGAATGGTACATTTTTTGGTGTTCAGCAAAAGGTTTTATTGA
AAGAAAAAAGTCTCTGGGAAATAACTGTTGAATCACTTAGATACCTGACAGAAAAAGGACTCCTACAAAA
AGACACTATTTATAAGTCTGAAGAAGAGGTCCAATATAATTTTCATATTACAAAGTTGGGACGTGCTTCA
TTTAAGGGAACTATAGATTTAGCTTATTGTGACATTCTGTACAGAGACTTGAAGAAAGGTCTTGAAGGAC
TTGTGCTTGAAAGCCTTCTTCATCTAATCTACCTAACAACCCCCTATGATCTGGTTTCACAGTGTAACCC
TGATTGGATGATATACTTCAGGCAGTTTAGCCAACTCAGTCCAGCAGAACAAAATGTAGCTGCCATTCTT
GGAGTCTCTGAAAGCTTTATTGGGAAGAAAGCATCAGGCCAAGCCATCGGAAAGAAGGTGGACAAGAACG
TTGTCAACAGGCTATATCTGTCTTTTGTTCTTTATACCTTGCTCAAAGAGACCAACATTTGGACTGTATC
TGAAAAATTTAATATGCCTCGAGGATATATACAAAATCTTCTCACTGGAACTGCCTCATTCTCATCTTGT
GTGTTACATTTCTGTGAGGAGCTTGAGGAGTTTTGGGTTTACAGAGCCCTTTTGGTAGAACTTACCAAGA
AGCTGACTTACTGTGTAAAGGCAGAATTAATCCCTCTCATGGAAGTTACTGGAGTTTTAGAGGGTCGAGC
AAAACAGTTATACAGTGCAGGTTACAAAAGTCTAATGCACTTAGCTAATGCAAATCCTGAAGTGCTCGTA
AGGACAATTGATCATTTATCAAGACGCCAAGCCAAGCAAATTGTTTCATCAGCAAAGATGCTGTTGCATG
AAAAAGCAGAAGCCCTGCAAGAAGAGGTAGAAGAGTTACTAAGATTGCCTTCTGATTTCCCTGGTGCTGT
GGCTTCTTCCACTGACAAAGCATGA

Translation (1034 aa):
MDECGSRIRRRVSLPKRNRPSLGCIFGAPTAAELVPGDEGKEEEEMVAENRRRKTAGVLPVEVQPLLLSD
SPECLVLGGGDTNPDLLRHMPTDRGVGDQPNDSEVDMFGDYDSFTENSFIAQVDDLEQKYMQLPEHKKHA
TDFATENLCSESIKNKLSITTIGNLTELQTDKHTENQSGYEGVTIEPGADLLYDVPSSQAIYFENLQNSS
NDLGDHSMKERDWKSSSHNTVNEELPHNCIEQPQQNDESSSKVRTSSDMNRRKSIKDHLKNAMTGNAKAQ
TPIFSRSKQLKDTLLSEEINVAKKTVESSSNDLGPFYSLPSKVRDLYAQFKGIEKLYEWQHTCLTLNSVQ
ERKNLIYSLPTSGGKTLVAEILMLQELLCCRKDVLMILPYVAIVQEKLHMIGEGSRGATLEMTLAKILYT
SKTTQIIGMSATLNNVEDLQKFLQAEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSD
TLKKMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKFLSKEYLKHKEKEKCEVIKNLKNIGNGN
LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLK
RNQYKQMIGRAGRAGIDTIGESILILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIA
TNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQYNFHITKLGRAS
FKGTIDLAYCDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDWMIYFRQFSQLSPAEQNVAAIL
GVSESFIGKKASGQAIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSC
VLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANANPEVLV
RTIDHLSRRQAKQIVSSAKMLLHEKAEALQEEVEELLRLPSDFPGAVASSTDKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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