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Report for CCDS7474.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7474.1 Public Homo sapiens 10 PYROXD2 24 110 108 CCDS HistoryNCBI Gene:84795Re-query CCDS DB by CCDS ID:7474.1Re-query CCDS DB by GeneID:84795See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7474.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370575.5 ENSP00000359607.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370575.5Link to Ensembl Protein Viewer:ENSP00000359607.4Re-query CCDS DB by Nucleotide ID:ENST00000370575Re-query CCDS DB by Protein ID:ENSP00000359607
Original member Current member NCBI NM_032709.3 NP_116098.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032709.3Link to Protein Sequence:NP_116098.2Re-query CCDS DB by Nucleotide ID:NM_032709Re-query CCDS DB by Protein ID:NP_116098Link to BLAST:NP_116098.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116098.2 581 Q8N2H3 581 100% 0 0

Chromosomal Locations for CCDS 7474.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 98383798 98383868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98384947 98385067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98387201 98387307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98388354 98388508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98390598 98390754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98391010 98391082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98392432 98392566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98392942 98393083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98395196 98395293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98395391 98395452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98397345 98397498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98400102 98400257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98407582 98407655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98407904 98407997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98410939 98410958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98415009 98415135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1746 nt):
ATGGCTGCAAGTGGCCGAGGTCTCTGCAAGGCTGTGGCCGCCTCTCCCTTCCCGGCGTGGAGACGAGATA
ACACGGAAGCCAGGGGAGGTCTGAAGCCTGAGTATGATGCGGTGGTGATAGGAGCAGGACACAACGGACT
GGTGGCTGCAGCGTACCTGCAGAGACTGGGGGTGAACACCGCCGTCTTCGAGAGGCGCCATGTGATCGGG
GGTGCAGCTGTCACTGAGGAGATCATCCCAGGGTTTAAGTTCTCCCGCGCGTCCTACCTGCTCAGCCTGC
TGAGGCCGCAGATTTACACTGATCTGGAGCTGAAGAAACATGGGCTGAGGCTTCATCTTCGAAACCCCTA
CTCCTTCACCCCCATGCTGGAAGAGGGTGCAGGCAGCAAGGTGCCCAGGTGCCTTCTGCTGGGCACAGAC
ATGGCAGAAAACCAGAAGCAGATCGCCCAGTTCTCCCAGAAGGATGCCCAGGTCTTTCCCAAATATGAGG
AGTTCATGCATCGCTTGGCATTAGCCATTGACCCTCTGCTGGATGCGGCCCCCGTGGACATGGCGGCCTT
CCAGCATGGCTCCTTGCTGCAAAGGATGAGGTCGCTCTCCACCCTCAAGCCCCTGCTGAAGGCAGGCCGC
ATCCTGGGAGCCCAGCTTCCCCGATATTATGAGGTCCTCACAGCTCCCATTACCAAGGTGCTGGATCAGT
GGTTCGAGTCTGAGCCTTTAAAAGCCACTCTAGCCACAGATGCAGTGATTGGAGCCATGACAAGTCCCCA
CACTCCGGGGAGTGGGTATGTGCTGCTGCACCATGTGATGGGGGGCCTGGAGGGAATGCAGGGGGCCTGG
GGCTACGTCCAGGGGGGCATGGGTGCCCTCTCTGATGCGATCGCAAGCTCAGCCACCACACATGGAGCAA
GCATCTTCACTGAAAAGACAGTGGCGAAGGTGCAGGTGAACAGTGAAGGCTGTGTTCAAGGAGTTGTGCT
GGAAGATGGCACAGAGGTGAGAAGCAAAATGGTGCTGTCCAACACATCACCGCAGATCACCTTCCTGAAG
CTGACGCCACAGGAGTGGCTTCCTGAGGAGTTCCTGGAGAGAATCTCTCAGCTGGACACCCGGTCGCCTG
TCACCAAGATCAATGTGGCCGTAGACAGGCTGCCCAGCTTCCTGGCGGCCCCCAATGCTCCCAGGGGCCA
GCCGCTGCCCCATCACCAATGCTCCATCCACCTGAACTGTGAAGACACCCTCCTCCTTCATCAGGCCTTT
GAAGATGCCATGGATGGCCTGCCTTCCCACAGGCCTGTGATTGAGCTCTGCATCCCTTCCTCGCTGGACC
CCACCCTGGCTCCCCCTGGCTGCCATGTAGTCTCCCTCTTCACTCAGTACATGCCCTATACGCTGGCTGG
AGGCAAGGCCTGGGACGAGCAGGAGAGAGACGCTTATGCAGACAGAGTGTTTGATTGCATCGAGGTCTAT
GCCCCTGGCTTCAAGGACTCTGTGGTTGGCAGAGACATCCTCACACCACCAGATTTGGAGAGAATCTTCG
GGCTTCCTGGAGGGAACATATTCCACTGCGCCATGTCCCTGGACCAGCTCTACTTCGCCCGCCCCGTGCC
CCTGCATTCTGGCTACCGCTGCCCTCTCCAGGGCCTGTATCTCTGTGGAAGTGGGGCTCATCCTGGAGGA
GGTGTGATGGGAGCTGCTGGGCGAAATGCAGCACATGTGGCCTTTAGGGACCTCAAGAGCATGTGA

Translation (581 aa):
MAASGRGLCKAVAASPFPAWRRDNTEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLGVNTAVFERRHVIG
GAAVTEEIIPGFKFSRASYLLSLLRPQIYTDLELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRCLLLGTD
MAENQKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAAPVDMAAFQHGSLLQRMRSLSTLKPLLKAGR
ILGAQLPRYYEVLTAPITKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHHVMGGLEGMQGAW
GYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNSEGCVQGVVLEDGTEVRSKMVLSNTSPQITFLK
LTPQEWLPEEFLERISQLDTRSPVTKINVAVDRLPSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAF
EDAMDGLPSHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYADRVFDCIEVY
APGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQGLYLCGSGAHPGG
GVMGAAGRNAAHVAFRDLKSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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