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Report for CCDS74708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74708.1 Public Homo sapiens 20 KIZ 24 110 108 CCDS HistoryNCBI Gene:55857Re-query CCDS DB by CCDS ID:74708.1Re-query CCDS DB by GeneID:55857See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74708.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616848.4 ENSP00000480612.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616848.4Link to Ensembl Protein Viewer:ENSP00000480612.1Re-query CCDS DB by Nucleotide ID:ENST00000616848Re-query CCDS DB by Protein ID:ENSP00000480612
Original member Current member NCBI NM_001163023.3 NP_001156495.1 Accepted alive Link to Nucleotide Sequence:NM_001163023.3Link to Protein Sequence:NP_001156495.1Re-query CCDS DB by Nucleotide ID:NM_001163023Re-query CCDS DB by Protein ID:NP_001156495Link to BLAST:NP_001156495.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156495.1 540 Q2M2Z5-5 540 100% 0 0

Chromosomal Locations for CCDS 74708.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 21132154 21132159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21161871 21162507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21162850 21163159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21205491 21205584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21214535 21214700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21215583 21215648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21229011 21229115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21232734 21232830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21244245 21244288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21246479 21246576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1623 nt):
ATGCAGGTTGCAGTGCACGAGGGGATTAACTCAGGAACAGCCATGTCAAGAGGATTGTATCAACCAGCAA
CAATCTTTATGGGCCGCCAAATGTCAGCCATCTTAAGCATGAGAGATTTCAGTACAGAGCACAAATCTCC
CCAGCCCACAAAGAACTTTTCAATTCCTGACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTG
ACAGACAGCTGTGTAGTACAAACTAGTAATGACACACAGTGCTTAAATAAGTCTGACAACATAGATGGAA
AGGCATCTCTTCAGATTGGTGAGAAAATGCCAGTCACAGCCAGTGTATTGTCTGAGGAGGAACAAACTCA
TTGCTTGGAGATAGGAAGTAACACACGTCATGGCAAGAGTAATTTATCTGAAGGCAAAAAGTCTGCTGAA
CTCAATTCCCCGTTACGGGAAAGATTAAGTCCAGAGAACAGAACCACTGATTTAAAGTGTGACAGTTCCA
GCGGATCAGAGGGAGAAATACTGACACGGGAACATATTGAAGTTGAGGAAAAAAGAGCCAGCCCGCCAGT
CTCTCCGATACCAGTTTCAGAATACTGTGAATCTGAAAATAAGTGGTCTCAAGAGAAGCATTCTCCTTGG
GAAGGTGTTTCAGATCATCTTGCTCACAGGGAACCAAAGTCACAAAAGCCCTTCAGAAAAATGCAGGAAG
AGGAGGAGGAAAGTTGGAGCACCAGCAGTGACCTTACCATTTCAATAAGTGAAGATGATCTGATTTTAGA
GAGCCCAGAACCACAGCCAAATCCAGGTGGCAAGATGGAGGGAGAAGATGGAATAGAGGCCTTAAAATTA
ATCCATGCTGAGCAAGAAAGAGTTGCCCTATCCACTGAAAAAAATTGTATTTTGCAAACCCTAAGCTCTC
CTGATTCAGAAAAGGAATCCTCCACTAACGCACCAACAAGAGAACCTGGACAAACACCAGACTCAGACGT
ACCGAGGGCACAGGTGGGTCAGCATGTTGCCACCTTGAAAGAACATGATAATTCTGTCAAAGAAGAGGCA
ACAGCATTATTGAGAAAAGCCCTTACAGAAGAGTGTGGCCGTAGGTCAGCTATTCACAGTAGTGAATCAT
CTTGCAGCTTGCCATCTATTCTGAATGACAATAGTGGAATAAAGGAAGCCAAACCTGCTGTATGGCTCAA
CAGTGTTCCTACAAGGGAACAAGAAGTTTCAAGTGGCTGTGGAGACAAGAGCAAGAAAGAAAATGTGGCT
GCAGATATCCCAATCACAGAAACAGAAGCCTATCAGTTGCTGAAGAAGGCCACCCTTCAGGATAATACAA
ATCAAACTGAAAACAGGTTTCAAAAGACAGATGCTTCTGTGTCACACTTGTCAGGTTTGAATATTGGCAG
CGGTGCATTCGAGACAAAGACAGCTAACAAAATTGCTTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGT
CCTTTGTCAAGGCATGAAAACAAAAAGAAACCCGTGATCAATTTAAAATCTAATGCCCTCTGGGATGAGT
CTGATGACAGTAACTCAGAAATTGAGGCTGCTTTACGCCCCAGAAACCATAACACCGATGATTCTGATGA
TTTTTATGACTAA

Translation (540 aa):
MQVAVHEGINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNV
TDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAE
LNSPLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPW
EGVSDHLAHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKL
IHAEQERVALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEA
TALLRKALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVA
ADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGS
PLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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