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Report for CCDS74682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74682.1 Public Homo sapiens 2 SEPTIN2 24 110 108 CCDS HistoryNCBI Gene:4735Re-query CCDS DB by CCDS ID:74682.1Re-query CCDS DB by GeneID:4735See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 74682.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616972.4 ENSP00000479861.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616972.4Link to Ensembl Protein Viewer:ENSP00000479861.1Re-query CCDS DB by Nucleotide ID:ENST00000616972Re-query CCDS DB by Protein ID:ENSP00000479861
Original member Current member NCBI NM_001282972.2 NP_001269901.1 Accepted alive Link to Nucleotide Sequence:NM_001282972.2Link to Protein Sequence:NP_001269901.1Re-query CCDS DB by Nucleotide ID:NM_001282972Re-query CCDS DB by Protein ID:NP_001269901Link to BLAST:NP_001269901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269901.1 396 Q15019-2 396 100% 0 0

Chromosomal Locations for CCDS 74682.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 241316468 241316555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241324216 241324241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241325993 241326113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241335126 241335212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241335975 241336098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241337382 241337516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241337673 241337790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241342992 241343093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241343752 241343897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241346166 241346249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241348134 241348191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241350073 241350174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGCCGTGGATAAGCGAGGGGAGAGCGACTAGGCCCTGTCTGCGGGTACCTTCGGCGAGGAGAGGCGACG
AAGGTCTGCACCAGCGAGACGAAGCTTCACAAAAGATGTCTAAGCAACAGCCAACTCAGTTTATAAATCC
AGAAACACCTGGCTATGTTGGATTTGCAAACCTCCCCAATCAAGTTCACCGAAAATCAGTGAAAAAAGGT
TTTGAGTTCACACTGATGGTGGTCGGTGAATCAGGTCTAGGAAAATCGACTCTCATAAACAGCCTATTCC
TAACTGATCTGTACCCAGAAAGAGTCATACCTGGAGCAGCAGAAAAAATTGAAAGAACTGTCCAGATTGA
GGCTTCAACTGTTGAAATTGAAGAGCGAGGGGTCAAGCTACGCCTGACAGTGGTAGATACCCCTGGCTAT
GGTGACGCTATCAACTGCAGAGATTGTTTTAAGACAATTATCTCCTATATTGATGAGCAATTTGAGAGGT
ACCTGCATGACGAGAGCGGCTTGAACAGGCGGCACATCATTGATAATAGGGTGCATTGTTGCTTTTACTT
TATTTCACCTTTTGGACATGGACTTAAGCCCTTAGATGTGGCGTTTATGAAGGCAATACACAACAAGGTG
AATATTGTGCCTGTCATTGCAAAAGCTGACACTCTCACCCTGAAGGAACGGGAGCGGCTGAAGAAAAGGA
TTCTGGATGAAATTGAAGAACATAACATCAAAATCTATCACTTACCTGATGCAGAATCAGATGAAGATGA
AGATTTTAAAGAGCAGACTAGACTTCTCAAGGCTAGCATCCCATTCTCTGTGGTTGGATCCAATCAGTTG
ATTGAAGCCAAAGGAAAGAAGGTCAGAGGCCGCCTCTACCCCTGGGGTGTTGTGGAAGTGGAGAACCCAG
AGCACAATGACTTTCTGAAGCTGAGAACCATGCTCATCACCCACATGCAGGATCTCCAGGAGGTGACCCA
GGACCTTCATTATGAAAACTTCCGTTCTGAGAGACTCAAGAGAGGCGGCAGGAAAGTGGAGAATGAGGAC
ATGAATAAAGACCAGATCTTGCTGGAAAAAGAAGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGGA
TGCAGGCGCAGATGCAGATGCAGATGCAGGGCGGGGATGGCGATGGCGGGGCTCTCGGGCACCACGTGTA
A

Translation (396 aa):
MPWISEGRATRPCLRVPSARRGDEGLHQRDEASQKMSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKG
FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGY
GDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKV
NIVPVIAKADTLTLKERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQL
IEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKVENED
MNKDQILLEKEAELRRMQEMIARMQAQMQMQMQGGDGDGGALGHHV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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