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Report for CCDS7459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7459.1 Public Homo sapiens 10 EXOSC1 24 110 108 CCDS HistoryNCBI Gene:51013Re-query CCDS DB by CCDS ID:7459.1Re-query CCDS DB by GeneID:51013See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370902.8 ENSP00000359939.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370902.8Link to Ensembl Protein Viewer:ENSP00000359939.3Re-query CCDS DB by Nucleotide ID:ENST00000370902Re-query CCDS DB by Protein ID:ENSP00000359939
Original member Current member NCBI NM_016046.5 NP_057130.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016046.5Link to Protein Sequence:NP_057130.1Re-query CCDS DB by Nucleotide ID:NM_016046Re-query CCDS DB by Protein ID:NP_057130Link to BLAST:NP_057130.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057130.1 195 Q9Y3B2 195 100% 0 0

Chromosomal Locations for CCDS 7459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97436445 97436551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97437191 97437275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97437700 97437750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97438670 97438703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97441171 97441259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97443237 97443311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97445732 97445847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97445955 97445985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGGCGCCACCTGTGAGATACTGCATCCCCGGCGAACGTCTGTGTAACTTGGAGGAGGGCAGCCCGGGCA
GCGGCACCTACACCCGCCACGGCTACATCTTTTCGTCGCTTGCCGGCTGTCTGATGAAGAGCAGCGAGAA
TGGCGCGCTTCCAGTGGTGTCTGTAGTGAGAGAAACAGAGTCCCAGTTACTGCCAGATGTGGGAGCTATT
GTAACCTGTAAGGTCTCTAGCATCAATTCACGCTTTGCCAAAGTACACATCCTGTATGTGGGGTCCATGC
CTCTTAAGAACTCTTTTCGAGGAACTATCCGCAAGGAAGATGTCCGAGCAACTGAAAAAGACAAGGTTGA
AATTTATAAGAGTTTCCGCCCAGGTGACATTGTCTTGGCCAAAGTGATCTCCTTAGGTGATGCACAGTCC
AACTACCTGCTAACCACCGCCGAGAACGAGCTGGGAGTGGTGGTAGCCCACAGTGAGTCAGGTATCCAGA
TGGTTCCCATCAGCTGGTGTGAGATGCAGTGCCCTAAGACCCACACTAAAGAATTCCGGAAAGTAGCCCG
AGTACAACCCGAATTCTTGCAGACCTAA

Translation (195 aa):
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGAI
VTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQS
NYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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