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Report for CCDS7454.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7454.2 Public Homo sapiens 10 ARHGAP19 24 110 108 CCDS HistoryNCBI Gene:84986Re-query CCDS DB by CCDS ID:7454.2Re-query CCDS DB by GeneID:84986See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7454.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358531.9 ENSP00000351333.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358531.9Link to Ensembl Protein Viewer:ENSP00000351333.4Re-query CCDS DB by Nucleotide ID:ENST00000358531Re-query CCDS DB by Protein ID:ENSP00000351333
Original member Current member NCBI NM_032900.6 NP_116289.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032900.6Link to Protein Sequence:NP_116289.4Re-query CCDS DB by Nucleotide ID:NM_032900Re-query CCDS DB by Protein ID:NP_116289Link to BLAST:NP_116289.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116289.4 494 Q14CB8-1 494 100% 0 0

Chromosomal Locations for CCDS 7454.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97226122 97226132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229147 97229225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229764 97229874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97235217 97235315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97243968 97244159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97246272 97246337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97256318 97256404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97259402 97259628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97263420 97263629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97264826 97264906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97265860 97266125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97292572 97292627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGGCGACTGAGGCACAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGCCGGAGTGATGCCATCTGCA
GT
TTTGTGATCTGCAATGATTCTTCCCTTCGAGGTCAGCCCATTATCTTTAATCCTGACTTTTTTGTGGA
G
AAACTCCGACATGAGAAACCTGAGATTTTCACTGAGTTGGTGGTCAGCAATATCACAAGGCTCATCGAT
TTA
CCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCCAG
CA
TCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGAAAAAGGAGTGATATTTGGGTCCCCACT
G
ACGGAGGAAGGCATTGCCCAGATATACCAACTGATTGAGTATCTACACAAAAACTTGCGAGTAGAGGGT
TTG
TTTAGAGTACCGGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACA
TT
GACTTGGAATCAGGGGAATTTCACTCAAATGATGTTGCCACTTTGCTGAAGATGTTTCTAGGAGAGTT
G
CCGGAGCCTCTGCTGACACATAAACACTTCAATGCACACCTCAAAATCGCTGATTTGATGCAGTTTGAT
GAT
AAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCA
TT
CTCCCTCCTCCTAATCGTAATTTGCTGAAGTTATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA
A
GACAAGAACAAGATGTCAGCCTATAACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAAAAAT
GTC
ACTGCAAATGACCTTCAGGAGAATATCACAAAGTTAAACAGTGGGATGGCTTTTATGATTAAACACT
CC
CAGAAACTTTTTAAGGCTCCTGCTTACATTCGGGAGTGTGCGAGATTGCACTATTTGGGATCCAGAAC
T
CAGGCATCAAAGGATGACCTTGACCTCATAGCTTCATGTCATACTAAGTCCTTTCAGCTGGCAAAGTCT
CAG
AAACGGAACCGGGTAGATTCCTGCCCTCACCAGGAGGAGACCCAGCACCATACGGAAGAGGCACTGA
GA
GAGCTGTTTCAACACGTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAACTTATTAGACAGTTTAA
T
AAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG
CGC
TCCTTCAGTGGGCTTATTAAGCGGAAGGTCCTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAGA
AC
CCTACTCCAGAATCTGTGGCCATTGGTGAATTGAAGGGAACCAGCAAAGAAAATAGGAACTTATTATT
T
TCTGGCTCTCCAGCTGTCACGATGACACCAACAAGATTGAAGTGGTCTGAAGGGAAGAAAGAGGGGAAA
AAA
GGATTTCTCTGA


Translation (494 aa):
MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVVSNITRLID
L
PGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRK
EKGVIFGSPLTEEGIAQIYQLIEYLHKNLRVEG
L
FRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLLKMFLGELPEPLLTHKHFNAHLKIA
DLMQFD
D
KGNKTNIPDKDRQIEALQLLFLILPPPNRNLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN

V
TANDLQENITKLNSGMAFMIKHSQKLFK
APAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKS
Q
KRNRVDSCPHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQ
FNKQSLTQTPGREPSTSQVQKRARS
R
SFSGLIK
RKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKWSEGKKEGK
K
GFL



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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