NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74510.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74510.1 Public Homo sapiens 2 TTC7A 24 110 108 CCDS HistoryNCBI Gene:57217Re-query CCDS DB by CCDS ID:74510.1Re-query CCDS DB by GeneID:57217See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74510.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409245.5 ENSP00000386307.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409245.5Link to Ensembl Protein Viewer:ENSP00000386307.1Re-query CCDS DB by Nucleotide ID:ENST00000409245Re-query CCDS DB by Protein ID:ENSP00000386307
Original member Current member NCBI NM_001288953.2 NP_001275882.1 Accepted alive Link to Nucleotide Sequence:NM_001288953.2Link to Protein Sequence:NP_001275882.1Re-query CCDS DB by Nucleotide ID:NM_001288953Re-query CCDS DB by Protein ID:NP_001275882Link to BLAST:NP_001275882.1

Chromosomal Locations for CCDS 74510.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 46917196 46917277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46950363 46950526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46956839 46957007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46974973 46975103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46978792 46978907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46993450 46993528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46994357 46994514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46995136 46995199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47005922 47006059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47006641 47006724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47011331 47011435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47021862 47021979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47023408 47023465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47024287 47024359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47029224 47029384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47046315 47046431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47049949 47050046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47051746 47051880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47060769 47060971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47073702 47073923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2475 nt):
ATGGTGCCCAGCTCGTCTCGAACTCCTGGGTTCAAGCAATCCTCCCACCACCTCCGCCTCCCAAAGTGCT
GGGATTACAGGGATGACTTTGGGAAATTGCTGCTGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAA
CCATGCCAAAATAAAAGACTCCATGCCTTTGCTGGAGAAGAATGAGCCGAAGATGAGCGAAGCCAAAAAT
TATCTAAGCAGTATCCTTAACCATGGGAGGCTCTCGCCACAGTACATGTGTGAGGCCATGCTGATCCTGG
GCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCCATCAGCATGTACGCACGGGCCGGGATTGATGA
CATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGCTGCTGTCGGAGGCTTTTGTCATCAAAGGCCTC
TCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTTCCGCCTGACAGAGAGGGAGGAGGAAGTGATCA
CCTGTTTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTCCTGCAGGAATTGGAGAAGACCACAAATAACAG
CACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACTATGAGCTCACCTACTTCCTGGAAGCTGCCCTC
CAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACATCGTGAAGGGCATGAGAGAGCTCCGGGAGGTGC
TGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGATGGCGGCCAAGCACCTGGCGGGGGTCCT
GCTGCACTCCCTGAGTGAGGAGTGCTACTGGAGCCCCCTGTCCCACCCTCTGCCTGAGTTCATGGGCAAG
GAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACCTCACCTCTATGAAGGAGACAACCTCTACTGCC
CCAAGGACAACATCGAGGAAGCCCTCCTGCTCCTCCTCATCAGCGAATCCATGGCAACTCGAGATGTGGT
GCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGACAGTGAGCTTGCAGAATGCCGCAGCCATCTATGAC
CTCCTGAGCATCACGTTGGGCAGAAGGGGACAGTACGTCATGCTCTCGGAGTGCCTGGAGCGAGCCATGA
AGTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGTGGCCCTCTCCATGGTGGCTTGTGGGAAGTCAGC
CTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCTGATGGCC
GCGAAGGTCTGCATCGGGTCCCTTCGCTGGCTAGAGGAAGCAGAGCACTTTGCCATGATGGTGATCAGCC
TCGGAGAGGAAGCCGGGGAGTTCCTCCCCAAGGGCTACCTGGCTCTGGGTCTCACCTATAGCCTGCAGGC
CACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCTGGAGAGGGCT
CAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTATGTCTCGCTGCAGCTGGCCCTCGTCCGACAGA
TCTCCAGTGCCATGGAGCAGCTGCAGGAGGCCCTGAAGGTACGCAAGGATGATGCCCACGCCCTCCACCT
GCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGCATGCCCTGGATGTTGTCAACATGGCCATCACC
GAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGTGAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGG
AAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGGCAGACCCTGTACAGCTTCTCCCAGCTGGGAGG
CCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCATGAAGAAGCAGAGTGGCATGCACCTGACTTTG
CCTGATGCCCATGATGCAGACTCTGGCTCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGAGG
CCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAGCAGGGCCCCATGCAGCTGTGGACCACGCTGGA
ACAGATCTGGCTGCAGGCTGCTGAGCTGTTCATGGAGCAGCAGCACCTCAAGGAAGCAGGTTTCTGCATC
CAGGAGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGTACTCTATATGCGGGGCCGGCTGGCTGAGGTGA
AGGGCAACCTGGAGGAGGCCAAGCAGCTGTACAAGGAGGCGCTCACGGTGAACCCAGATGGCGTGCGCAT
CATGCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCCACAAGAGCTTGGCCCAGAAGGTGCTTCGTGAT
GCCGTGGAGAGGCAGAGTACGTGCCACGAGGCGTGGCAGGGCCTGGGCGAGGTGCTGCAGGCCCAGGGCC
AGAACGAGGCTGCCGTTGACTGCTTCCTCACCGCCCTTGAGCTGGAGGCCAGCAGCCCTGTACTGCCCTT
CTCCATCATCCCCAGAGAGCTCTGA

Translation (824 aa):
MVPSSSRTPGFKQSSHHLRLPKCWDYRDDFGKLLLAEALLEQCLKENHAKIKDSMPLLEKNEPKMSEAKN
YLSSILNHGRLSPQYMCEAMLILGKLHYVEGSYRDAISMYARAGIDDMSMENKPLYQMRLLSEAFVIKGL
SLERLPNSIASRFRLTEREEEVITCFERASWIAQVFLQELEKTTNNSTSRHLKGCHPLDYELTYFLEAAL
QSAYVKNLKKGNIVKGMRELREVLRTVETKATQNFKVMAAKHLAGVLLHSLSEECYWSPLSHPLPEFMGK
EESSFATQALRKPHLYEGDNLYCPKDNIEEALLLLLISESMATRDVVLSRVPEQEEDRTVSLQNAAAIYD
LLSITLGRRGQYVMLSECLERAMKFAFGEFHLWYQVALSMVACGKSAYAVSLLRECVKLRPSDPTVPLMA
AKVCIGSLRWLEEAEHFAMMVISLGEEAGEFLPKGYLALGLTYSLQATDATLKSKQDELHRKALQTLERA
QQLAPSDPQVILYVSLQLALVRQISSAMEQLQEALKVRKDDAHALHLLALLFSAQKHHQHALDVVNMAIT
EHPENFNLMFTKVKLEQVLKGPEEALVTCRQVLRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQSGMHLTL
PDAHDADSGSRRASSIAASRLEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCI
QEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRD
AVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTALELEASSPVLPFSIIPREL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH