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Report for CCDS74437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74437.1 Public Homo sapiens 19 ZNF480 24 110 108 CCDS HistoryNCBI Gene:147657Re-query CCDS DB by CCDS ID:74437.1Re-query CCDS DB by GeneID:147657See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74437.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335090.6 ENSP00000335670.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335090.6Link to Ensembl Protein Viewer:ENSP00000335670.6Re-query CCDS DB by Nucleotide ID:ENST00000335090Re-query CCDS DB by Protein ID:ENSP00000335670
Original member Current member NCBI NM_001297625.2 NP_001284554.1 Accepted alive Link to Nucleotide Sequence:NM_001297625.2Link to Protein Sequence:NP_001284554.1Re-query CCDS DB by Nucleotide ID:NM_001297625Re-query CCDS DB by Protein ID:NP_001284554Link to BLAST:NP_001284554.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284554.1 458 Q8WV37-2 458 100% 0 0

Chromosomal Locations for CCDS 74437.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52315866 52315962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52321579 52322858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGTTGGAGCAAAGGAGGGAGCCCTGGTCTGGTGAGAGTGAAGTGAAAATAGCAAAAAATTCAGATGGGA
GGGAGTGCATCAAAGGTGTGAACACAGGGAGCAGCTATGCATTGGGAAGCAATGCAGAAGACAAACCAAT
TAAAAAACAACTTGGAGTATCCTTTCACTTACATCTGTCTGAACTGGAGCTATTTCCAGATGAAAGGGTA
ATAAATGGATGTAATCAAGTTGAAAACTTTATCAACCACAGTTCCTCTGTTTCCTGTCTTCAAGAAATGT
CTTCCAGTGTCAAAACCCCCATTTTTAATAGGAATGATTTTGATGATTCTTCATTTCTCCCACAAGAACA
GAAAGTACACCTTAGAGAAAAACCTTATGAATGTAATGAGCATAGCAAAGTCTTTAGAGTATCTTCCAGC
CTTACTAAACATCAAGTAATCCATACTGTAGAGAAACCTTACAAATGTAATTCATGCGGCAAGGTCTTTA
GTCGCAATTCACACCTTGCAGAACATTGTAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGTCTG
TGGCAAGGTTTTTAGTTACAATTCAAACTTTGCACGACATCAAAGAATTCATACCAGAGAGAAGCCGTAT
GAATGTAATGAATGTGGTAAAGTCTTCAGTAATAATTCTTACCTTGCACGACATCAAAGAATTCATGCTG
AAGAGAAACCTTACAAATGTAATGAATGTGGTAAAGGCTTCAGTCATAAGTCATCTCTAGCAAATCATTG
GAGAATTTATACTGGAGAGAAGCCTTACAAATGTGATGAATGTGGCAAGGCCTTCTATAGGATTGCGCTC
CTTGTACGACATCAGAAAATTCATACTGGAGAGAAACCTTACAAATGTAATGAATGTGGAAAGGTCTTTA
TTCAAAATTCGCACCTAGCACAACATTGGAGAATTCATACAGGAGAGAAACCTTACAAATGTAATGAATG
TGGAAAAGTATTTAATCAACTTTCAAATCTTGCACGACATCGAAGAATTCATACTGGAGAGAAGCCTTAC
AAATGTAATGAATGTGGTAAAGCATTTAGTGAGTATTCAGGCCTTTCAGCCCATCTTGTAATCCACACTG
GAGAGAAGCCTTACAAATGTAGTGAATGTGGCAAGGCATTCAGACACAAGTTATCACTAACCAATCATCA
GAGAATCCATACTGGAGAAAGACCTTACAAATGTAATGAATGTGGCAAGGTCTTCAATCGAATTGCACAC
CTTGCACGACATCGGAAAATTCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGCCTTTA
GTCGCATTTCATACCTAGCACAACATTGGACAATTCATATGGGATAG

Translation (458 aa):
MLEQRREPWSGESEVKIAKNSDGRECIKGVNTGSSYALGSNAEDKPIKKQLGVSFHLHLSELELFPDERV
INGCNQVENFINHSSSVSCLQEMSSSVKTPIFNRNDFDDSSFLPQEQKVHLREKPYECNEHSKVFRVSSS
LTKHQVIHTVEKPYKCNSCGKVFSRNSHLAEHCRIHTGEKPYKCNVCGKVFSYNSNFARHQRIHTREKPY
ECNECGKVFSNNSYLARHQRIHAEEKPYKCNECGKGFSHKSSLANHWRIYTGEKPYKCDECGKAFYRIAL
LVRHQKIHTGEKPYKCNECGKVFIQNSHLAQHWRIHTGEKPYKCNECGKVFNQLSNLARHRRIHTGEKPY
KCNECGKAFSEYSGLSAHLVIHTGEKPYKCSECGKAFRHKLSLTNHQRIHTGERPYKCNECGKVFNRIAH
LARHRKIHTGEKPYKCNECGKAFSRISYLAQHWTIHMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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