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Report for CCDS74393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74393.1 Public Homo sapiens 19 CEACAM20 24 110 108 CCDS HistoryNCBI Gene:125931Re-query CCDS DB by CCDS ID:74393.1Re-query CCDS DB by GeneID:125931See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74393.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614924.5 ENSP00000481937.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614924.5Link to Ensembl Protein Viewer:ENSP00000481937.1Re-query CCDS DB by Nucleotide ID:ENST00000614924Re-query CCDS DB by Protein ID:ENSP00000481937
Original member Current member NCBI NM_001102597.3 NP_001096067.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001102597.3Link to Protein Sequence:NP_001096067.2Re-query CCDS DB by Nucleotide ID:NM_001102597Re-query CCDS DB by Protein ID:NP_001096067Link to BLAST:NP_001096067.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096067.2 596 Q6UY09-1 596 100% 0 0

Chromosomal Locations for CCDS 74393.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44506161 44506214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44511030 44511155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44511637 44511672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44512017 44512078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44512868 44512953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44513172 44513289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44516946 44517224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44520474 44520752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44522634 44522912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44523986 44524261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44525101 44525244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44529458 44529509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGGGGCCTGCTGACTCATGGGGACACCACTGGATGGGAATCCTGCTTTCAGCCTCGCTTTGTACCGTAT
GGAGTCCTCCAGCTGCAGCCCAGCTCACCCTCAATGCCAACCCACTTGATGCCACCCAAAGTGAGGATGT
TGTTCTGCCTGTGTTTGGGACCCCCAGGACACCCCAGATTCATGGCAGATCCAGAGAGCTGGCCAAACCC
TCCATTGCAGTCAGCCCAGGCACTGCCATAGAGCAGAAGGACATGGTGACCTTCTACTGCACCACTAAGG
ACGTCAACATTACCATCCACTGGGTTTCCAACAACCTCTCCATTGTGTTCCATGAGCGCATGCAGCTGTC
CAAGGATGGCAAGATCCTCACCATTCTCATTGTCCAGCGGGAGGACTCAGGGACTTACCAATGTGAAGCT
CGAGATGCCCTTCTGAGCCAGAGGAGCGACCCCATCTTCCTGGATGTGAAGTATGGTCCTGATCCTGTTG
AAATCAAATTGGAGTCTGGTGTTGCCAGTGGGGAGGTGGTTGAGGTGATGGAGGGCTCCAGCATGACCTT
CTTAGCGGAAACAAAGTCTCACCCACCCTGTGCCTATACTTGGTTTCTCCTTGACTCCATTCTGTCTCAC
ACCACGAGAACATTCACCATCCATGCTGTGTCCAGAGAACATGAGGGCCTGTACAGGTGCTTGGTGTCCA
ACAGTGCCACCCACCTGTCCAGCCTGGGTACTCTGAAGGTCCGAGTACTTGAAACACTGACCATGCCTCA
AGTCGTGCCTTCAAGCCTGAACCTTGTGGAGAATGCTAGGTCTGTGGACCTGACCTGCCAAACCGTCAAT
CAGAGTGTGAATGTCCAGTGGTTCCTAAGTGGCCAGCCCCTCCTGCCCAGTGAGCACCTGCAGCTGTCAG
CTGACAACAGGACCCTAATCATCCATGGCCTCCAGCGGAATGACACCGGGCCCTATGCCTGTGAGGTCTG
GAACTGGGGCAGCCGGGCCCGGAGTGAGCCCCTTGAGCTGACCATCAACTATGGTCCTGACCAAGTGCAC
ATCACCAGGGAGTCGGCATCTGAGATGATCAGCACCATAGAGGCAGAGCTCAACTCCAGCCTGACCCTGC
AGTGTTGGGCCGAGTCCAAGCCAGGTGCTGAGTATCGCTGGACTCTTGAACACTCCACCGGGGAGCACCT
GGGTGAGCAGCTGATTATCAGGGCTCTGACCTGGGAACACGACGGGATCTACAACTGCACAGCCTCCAAC
TCTCTCACTGGCCTGGCCCGCTCCACTTCAGTCCTGGTCAAGGTGGTAGGTCCCCAGTCCTCCTCCCTGT
CCTCAGGGGCCATCGCTGGTATTGTCATCGGGATCCTGGCTGTCATTGCTGTGGCCTCAGAACTGGGCTA
TTTTCTCTGCATCAGAAATGCCAGACGGCCCTCAAGGAAAACAACAGAGGACCCCAGTCATGAGACCTCA
CAACCCATCCCGAAGGAGGAGCACCCCACAGAGCCCAGTTCCGAAAGCCTGAGTCCTGAGTATCGCAATA
TATCCCAGCTTCAGGGACGGATCAGAGTCGAACTGATGCAACCACCAGACCTTCCAGAGGAGACCTATGA
GACGAAGCTGCCTTCAGCAAGCCGTAGAGGCAATTCTTTCAGCCCCTGGAAGCCACCACCCAAACCTCTG
ATGCCCCCACTCAGATTGGTCTCCACTGTGCCAAAAAACATGGAGTCAATCTATGAGGAGCTTGTGAATC
CAGAGCCCAACACTTACATCCAAATCAACCCCTCCGTCTAA

Translation (596 aa):
MGPADSWGHHWMGILLSASLCTVWSPPAAAQLTLNANPLDATQSEDVVLPVFGTPRTPQIHGRSRELAKP
SIAVSPGTAIEQKDMVTFYCTTKDVNITIHWVSNNLSIVFHERMQLSKDGKILTILIVQREDSGTYQCEA
RDALLSQRSDPIFLDVKYGPDPVEIKLESGVASGEVVEVMEGSSMTFLAETKSHPPCAYTWFLLDSILSH
TTRTFTIHAVSREHEGLYRCLVSNSATHLSSLGTLKVRVLETLTMPQVVPSSLNLVENARSVDLTCQTVN
QSVNVQWFLSGQPLLPSEHLQLSADNRTLIIHGLQRNDTGPYACEVWNWGSRARSEPLELTINYGPDQVH
ITRESASEMISTIEAELNSSLTLQCWAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASN
SLTGLARSTSVLVKVVGPQSSSLSSGAIAGIVIGILAVIAVASELGYFLCIRNARRPSRKTTEDPSHETS
QPIPKEEHPTEPSSESLSPEYRNISQLQGRIRVELMQPPDLPEETYETKLPSASRRGNSFSPWKPPPKPL
MPPLRLVSTVPKNMESIYEELVNPEPNTYIQINPSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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