NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74385.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74385.2 Public Homo sapiens 19 PINLYP 24 110 108 CCDS HistoryNCBI Gene:390940Re-query CCDS DB by CCDS ID:74385.2Re-query CCDS DB by GeneID:390940See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 74385.1
The coding region has been updated to shorten the N-terminus to one that is more supported by conservation.

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 74385.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599207.6 ENSP00000469886.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000599207.6Link to Ensembl Protein Viewer:ENSP00000469886.1Re-query CCDS DB by Nucleotide ID:ENST00000599207Re-query CCDS DB by Protein ID:ENSP00000469886
Original member Current member NCBI NM_001193621.3 NP_001180550.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001193621.3Link to Protein Sequence:NP_001180550.2Re-query CCDS DB by Nucleotide ID:NM_001193621Re-query CCDS DB by Protein ID:NP_001180550Link to BLAST:NP_001180550.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180550.2 204 A6NC86-1 204 100% 0 0

Chromosomal Locations for CCDS 74385.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43577192 43577261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43578590 43578706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43581212 43581364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43581563 43581703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43581868 43582001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGAGGCTCTCCAGGAGACCAGAGACCTTTCTGCTGGCCTTTGTGTTGCTCTGCACCCTCCTGGGTCTTG
GGTGCCCACTACACTGCGAAATATGTACGGCGGCGGGGAGCAGGTGCCATGGCCAAATGAAGACCTGCAG
CAGTGACAAGGACACATGTGTGCTCCTGGTCGGGAAGGCTACTTCAAAGGGCAAGGAGTTGGTGCACACC
TACAAGGGCTGCATCAGGTCCCAGGACTGCTACTCCGGCGTTATATCCACCACCATGGGCCCCAAGGACC
ACATGGTAACCAGCTCCTTCTGCTGCCAGAGCGACGGCTGCAACAGTGCCTTTTTGTCTGTTCCCTTGAC
CAATCTTACTGAGAATGGCCTGATGTGCCCCGCCTGCACTGCGAGCTTCAGGGACAAATGCATGGGGCCC
ATGACCCACTGTACTGGAAAGGAAAACCACTGCGTCTCCTTATCTGGACACGTGCAGGCTGGTATTTTCA
AACCCAGATTTGCTATGCGGGGCTGTGCTACAGAGAGTATGTGCTTTACCAAGCCTGGTGCTGAAGTACC
CACAGGCACCAATGTCCTCTTCCTCCATCATATAGAGTGCACTCACTCCCCCTGA

Translation (204 aa):
MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHT
YKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGP
MTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFTKPGAEVPTGTNVLFLHHIECTHSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH