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Report for CCDS73928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73928.1 Public Homo sapiens 16 ZNF778 24 110 108 CCDS HistoryNCBI Gene:197320Re-query CCDS DB by CCDS ID:73928.1Re-query CCDS DB by GeneID:197320See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73928.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433976.7 ENSP00000405289.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000433976.7Link to Ensembl Protein Viewer:ENSP00000405289.3Re-query CCDS DB by Nucleotide ID:ENST00000433976Re-query CCDS DB by Protein ID:ENSP00000405289
Original member Current member NCBI NM_001201407.2 NP_001188336.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001201407.2Link to Protein Sequence:NP_001188336.1Re-query CCDS DB by Nucleotide ID:NM_001201407Re-query CCDS DB by Protein ID:NP_001188336Link to BLAST:NP_001188336.1
Original member Current member NCBI NM_001378881.1 NP_001365810.1 Accepted alive Link to Nucleotide Sequence:NM_001378881.1Link to Protein Sequence:NP_001365810.1Re-query CCDS DB by Nucleotide ID:NM_001378881Re-query CCDS DB by Protein ID:NP_001365810Link to BLAST:NP_001365810.1

Chromosomal Locations for CCDS 73928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89221128 89221152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89222092 89222183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89223157 89223283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89224719 89224802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89225555 89225631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89226694 89228562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGGCAGCCCCTGACCTGGCCCACGGAGGTCATGTTTCTAGGGACTCAGTCTGCCTTCATGAAGAACAGA
CACAGGCAGCAGGGATGGTGGCTGGCTGGCTGATAAATTGTTACCAGGACGCGGTGACCTTTGACGACGT
GGCTGTGGACTTCACCCAGGAGGAATGGACTTTACTGGACCCATCTCAGAGAGACCTCTACAGAGATGTG
ATGCTGGAAAACTACGAGAACCTGGCCTCAGTAGGACATCACCTGTTCCAACCCAGTGTGATCTATTGGC
TGGAGCAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTTCTCCAAGAATGGCGACTTAAAACCAAAGG
GCCAGCACTTCGGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACGGCAAGAAGCCACAAT
GGAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTTCAGTGAACACTCAGGCCTCAGCACACACG
TGAGAACTCAAAATACAGGAGACAGTTGTGTGTCTAATCATTATGAAAGGGACTTTTTTATTCCATGCCA
GAAAACCTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTTCAGCTCTACT
CCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGT
TCCTTAATCAGTCATACCTTCAGGCACGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCC
GTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCC
CACGTATGTAGGGAATGTGGGAAGGCCTTTAGGTACACTGCCTACCTTACTGGTCGCGTGCAAGTCCACC
CTGGGGAAAAGCCCTGTGAATTGGAAGAATGTGGAAAAGCCTCCCCTGTTTCTTCCAGCCTAACTCAACA
TGTAAGAATTCATGCTGCAGAGAAACCCTGTGAATGTAAAGAATGCGGAAAAGCCTTCACTGGACTCTCA
GGTCTTTCTAAACACGTCCAAACAGACCCTGGACAGAAGCCCTATGAATGTAAGGACTGTGGGAAAGCCT
GCGGTGGGTTTTATCTACTGAATGAGCATGGAAAAACTCACACGAGGGAGAAGCCCTTTGCATGTGTGGT
TTGCGGAAAATATTTTAGAAATTCCTCATGCCTTAATAATCATGTTCGAATTCACACTGGAATAAAACCC
TATACATGCAGCTACTGTGGGAAGGCCTTCACTGTGCGCTGTGGCCTTACTAGACACGTACGAACACACA
CGGGCGAGAAGCCATACACGTGTAAGGACTGCGGGAAAGCCTTCTGTACATCCTCGGGCCTTACTGAGCA
TGTAAGGACTCACACTGGAGAGAAACCATATGAATGTAAAGATTGTGGGAAATCCTTCACTGTTTCTTCA
AGCCTGACTGAGCACGCGAGAATCCATACCGGAGAGAAACCCTACGAATGTAAGCAGTGTGGCAAAGCCT
TCACAGGGCGCTCAGGCCTCACTAAACACATGCGGACACACACCGGGGAGAAGCCCTATGAATGTAAGGA
CTGTGGGAAAGCCTACAATAGGGTTTATCTACTGAATGAGCATGTGAAAACTCACACAGAGGAGAAGCCC
TTTATATGTACGGTATGCAGGAAATCCTTCAGAAATTCCTCGTGCCTGAATAAGCACATTCAGATTCACA
CTGGAATAAAACCTTATGAATGTAAGGACTGTGGGAAAACATTCACTGTTTCTTCGAGCCTAACCGAGCA
CATACGAACTCACACTGGAGAGAAACCTTATGAATGTAAAGTATGCGGAAAGGCCTTCACCACATCCTCA
CACCTTATCGTGCACATAAGAACCCACACCGGTGAGAAACCCTACATATGTAAGGAGTGTGGGAAAGCCT
TTGCTTCCTCCTCACACCTTATCGAACACAGAAGGACTCACACAGGAGAGAAACCTTACATATGTAACGA
GTGTGGGAAAGCCTTCCGTGCCTCCTCTCACCTGCATAAACATGGAAGAATTCACACTGGGCAGAAACCC
TATAAATGTAAGGAATGTGGGAAAGCATACAATAGGTTTTATCTACTAAAAGAACATTTAAAAACTTACA
CTGAAGAGCAGGTTTTTGTATGTAAGGACTGTGGAAAATCTTTTAAGAATTCCTCATGCCTTAACCATCA
CACTCAAATTCACACTGATGAGAAACCTTTCTAA

Translation (757 aa):
MAAPDLAHGGHVSRDSVCLHEEQTQAAGMVAGWLINCYQDAVTFDDVAVDFTQEEWTLLDPSQRDLYRDV
MLENYENLASVGHHLFQPSVIYWLEQEEELRAGRRAVLQEWRLKTKGPALRQDRSWFRASNETQTARSHN
GGQLCDRTQCGEAFSEHSGLSTHVRTQNTGDSCVSNHYERDFFIPCQKTLFKIGEQFSVLGQCGKAFSST
PNVVSQQACTRDRSLDYSSCGEVFLNQSYLQARAGSHNGEETWKWKPCGKALTHSMGCATPVEMHAVRNP
HVCRECGKAFRYTAYLTGRVQVHPGEKPCELEECGKASPVSSSLTQHVRIHAAEKPCECKECGKAFTGLS
GLSKHVQTDPGQKPYECKDCGKACGGFYLLNEHGKTHTREKPFACVVCGKYFRNSSCLNNHVRIHTGIKP
YTCSYCGKAFTVRCGLTRHVRTHTGEKPYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSS
SLTEHARIHTGEKPYECKQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKP
FICTVCRKSFRNSSCLNKHIQIHTGIKPYECKDCGKTFTVSSSLTEHIRTHTGEKPYECKVCGKAFTTSS
HLIVHIRTHTGEKPYICKECGKAFASSSHLIEHRRTHTGEKPYICNECGKAFRASSHLHKHGRIHTGQKP
YKCKECGKAYNRFYLLKEHLKTYTEEQVFVCKDCGKSFKNSSCLNHHTQIHTDEKPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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