NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73924.1 Public Homo sapiens 16 ZC3H18 24 110 108 CCDS HistoryNCBI Gene:124245Re-query CCDS DB by CCDS ID:73924.1Re-query CCDS DB by GeneID:124245See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452588.6 ENSP00000416951.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452588.6Link to Ensembl Protein Viewer:ENSP00000416951.2Re-query CCDS DB by Nucleotide ID:ENST00000452588Re-query CCDS DB by Protein ID:ENSP00000416951
Original member Current member NCBI NM_001294340.2 NP_001281269.1 Accepted alive Link to Nucleotide Sequence:NM_001294340.2Link to Protein Sequence:NP_001281269.1Re-query CCDS DB by Nucleotide ID:NM_001294340Re-query CCDS DB by Protein ID:NP_001281269Link to BLAST:NP_001281269.1

Chromosomal Locations for CCDS 73924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 88577124 88577726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88586600 88586684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88587542 88587613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88598178 88598326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88598620 88598712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88599791 88599948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88608934 88609051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88611268 88611536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88622197 88622388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88623219 88623344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88623958 88624062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88624602 88624745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88625202 88625267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88627622 88627782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88627920 88628119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88628758 88628854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88630485 88630581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 88631101 88631299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2934 nt):
ATGGATGTGGCCGAGAGCCCTGAACGGGATCCTCACTCTCCAGAGGATGAAGAGCAGCCACAGGGACTCT
CGGACGATGACATTCTGAGGGACAGCGGGTCCGATCAGGATTTGGACGGGGCGGGGGTGAGGGCTTCTGA
TCTGGAGGATGAGGAAAGTGCAGCCAGGGGGCCGAGCCAGGAGGAGGAAGATAATCACTCCGACGAGGAG
GACCGGGCAAGTGAGCCTAAATCCCAAGACCAGGACTCAGAGGTGAATGAGCTGAGCCGGGGCCCGACCA
GCTCCCCCTGCGAGGAGGAGGGGGACGAAGGGGAGGAAGACCGGACAAGCGACCTTAGGGATGAGGCCTC
CTCAGTCACCAGGGAGCTGGATGAGCATGAGCTAGACTACGATGAGGAGGTTCCTGAGGAGCCAGCTCCC
GCCGTCCAGGAGGACGAGGCTGAGAAAGCGGGGGCTGAGGATGATGAGGAGAAAGGCGAAGGCACTCCCA
GGGAGGAGGGGAAGGCTGGTGTTCAGAGTGTGGGAGAAAAGGAATCCCTGGAGGCTGCCAAGGAGAAAAA
GAAAGAGGACGATGATGGAGAAATCGATGATGGGGAAATAGACGATGATGACCTGGAAGAAGGTGAAGTG
AAGGACCCCAGTGACAGGAAGGTGAGGCCTCGTCCCACCTGCCGGTTCTTCATGAAAGATGTTGTGACAC
CATTATCCACTCTTCTTCCACCAATATCCAATTCCATACCATTCAGAGGCCAGGTTAAAGGGAACTGTAC
CTGGGGAATGAATTGTAGGTTTATACACCCTGGAGTGAACGACAAGGGGAACTACTCCCTAATCACCAAA
GCCGACCCCTTCCCGCCTAATGGTGCCCCGCCTCTCGGACCTCACCCGCTGATGCCCGCCAACCCTTGGG
GTGGGCCGGTAGTTGATGAAATTTTGCCTCCACCCCCTCCAGAGCCCCCAACAGAGAGTGCCTGGGAACG
AGGACTCCGGCATGCAAAGGAGGTTTTAAAAAAAGCAACTATTCGAAAAGAACAGGAGCCTGATTTTGAA
GAGAAAAGGTTTACGGTGACCATTGGCGAAGACGAACGGGAATTTGACAAAGAAAATGAAGTTTTTCGAG
ATTGGAATTCTCGGATCCCGAGAGATGTCAGAGACACAGTACTCGAGCCTTACGCAGACCCTTATTATGA
CTATGAAATTGAGCGGTTTTGGCGTGGCGGACAGTATGAGAATTTCAGGGTGCAGTATACAGAAACAGAG
CCGTATCATAATTACCGAGAAAGGGAGCGGGAGCGAGAGAGAGAGAACAGACAGCGCGAGCGCGAGCGGG
AGCGGGAGCGGGACCGAGAGCGGGAGCGCCGGCAGAGGGAGCGCGAGCGAGAGCGGGAGCGCGAGCGCGA
CAAGGAGCGGCAGCGGAGGAAGGAGGAGTGGGAGCGTGAGCGAGCCAAGCGGGACGAGAAGGACCGGCAG
CACCGTGACCGCGACCGGGAGAAGGAGCGGGAGAAGGAGAAGGGGAAGCCCAAGCCCCGCTCCCCGCAGC
CGCCAAGCCGCCAAGCTGAGCCACCAAAGAAGGAGGCTGCCACCACGGGGCCGCAGGTGAAGAGAGCAGA
TGAGTGGAAGGACCCTTGGCGCCGATCCAAGTCTCCCAAGAAGAAACTCGGGGTGTCGGTCTCCCCGAGC
CGGGCTCGAAGGCGTCGGAAAACATCAGCCTCGTCAGCCTCTGCCTCTAATTCCTCCAGGTCGTCTTCGC
GGTCATCGTCCTACTCTGGCTCCGGCTCCTCCCGGTCGCGATCCCGGTCTTCATCCTACAGCTCCTACTC
CAGCCGCTCTTCCAGACACAGCTCGTTCTCAGGAAGCCGGTCCAGGTCCCGGTCCTTCTCTTCGTCCCCG
TCCCCGTCCCCAACACCTTCCCCACATAGACCTTCCATCAGAACCAAGGGAGAGCCGGCCCCGCCGCCCG
GGAAAGCAGGAGAGAAGTCAGTGAAGAAGCCGGCCCCGCCTCCAGCCCCACCACAGGCCACCAAAACCAC
TGCTCCTGTCCCCGAGCCCACCAAGCCAGGAGACCCTCGGGAAGCCAGGAGGAAGGAGCGGCCAGCCAGG
ACCCCCCCCAGGAGGCGGACGCTAAGCGGCAGCGGCAGTGGCAGTGGTAGCAGCTATAGTGGTTCCAGCT
CCCGATCCAGGTCCCTGAGCGTGAGCAGCGTCTCCTCAGTGTCCAGTGCTACGTCGAGCAGCAGCTCTGC
ACACAGCGTGGACTCGGAGGACATGTACGCAGACCTGGCTAGCCCCGTGTCCTCAGCCAGCTCTCGGTCC
CCGGCCCCAGCCCAGACCAGGAAGGAGAAAGGAAAATCTAAGAAAGAAGACGGTGTTAAAGAGGAAAAGC
GGAAAAGGGATTCGTCCACACAACCACCCAAATCTGCAAAACCTCCAGCAGGGGGGAAGTCCTCCCAGCA
GCCCTCGACACCCCAGCAGGCACCCCCCGGGCAGCCCCAGCAGGGCACATTTGTGGCCCACAAGGAGATC
AAGTTGACACTGTTGAATAAGGCGGCTGATAAAGGAAGCAGGAAGCGCTATGAACCATCAGACAAGGACA
GGCAGAGCCCTCCTCCAGCCAAGCGGCCCAACACATCCCCAGACCGAGGTTCTCGGGACCGGAAGTCAGG
TGGGAGACTGGGCTCCCCGAAGCCAGAGCGGCAGAGAGGCCAGAACTCCAAAGCCCCTGCAGCCCCGGCT
GACAGGAAGCGCCAGCTGTCACCCCAGTCCAAGAGCTCCAGCAAGGTCACGAGCGTGCCCGGCAAAGCCT
CGGATCCCGGCGCCGCCAGCACCAAATCAGGGAAGGCCAGCACGCTGTCTCGGCGGGAGGAGCTGCTGAA
ACAGCTGAAGGCCGTGGAGGATGCTATTGCACGCAAGCGGGCCAAGATCCCCGGGAAAGCATAG

Translation (977 aa):
MDVAESPERDPHSPEDEEQPQGLSDDDILRDSGSDQDLDGAGVRASDLEDEESAARGPSQEEEDNHSDEE
DRASEPKSQDQDSEVNELSRGPTSSPCEEEGDEGEEDRTSDLRDEASSVTRELDEHELDYDEEVPEEPAP
AVQEDEAEKAGAEDDEEKGEGTPREEGKAGVQSVGEKESLEAAKEKKKEDDDGEIDDGEIDDDDLEEGEV
KDPSDRKVRPRPTCRFFMKDVVTPLSTLLPPISNSIPFRGQVKGNCTWGMNCRFIHPGVNDKGNYSLITK
ADPFPPNGAPPLGPHPLMPANPWGGPVVDEILPPPPPEPPTESAWERGLRHAKEVLKKATIRKEQEPDFE
EKRFTVTIGEDEREFDKENEVFRDWNSRIPRDVRDTVLEPYADPYYDYEIERFWRGGQYENFRVQYTETE
PYHNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERAKRDEKDRQ
HRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPS
RARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSP
SPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPREARRKERPAR
TPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSRS
PAPAQTRKEKGKSKKEDGVKEEKRKRDSSTQPPKSAKPPAGGKSSQQPSTPQQAPPGQPQQGTFVAHKEI
KLTLLNKAADKGSRKRYEPSDKDRQSPPPAKRPNTSPDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPA
DRKRQLSPQSKSSSKVTSVPGKASDPGAASTKSGKASTLSRREELLKQLKAVEDAIARKRAKIPGKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH