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Report for CCDS73582.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73582.1 Public Homo sapiens 13 KLHL1 24 110 108 CCDS HistoryNCBI Gene:57626Re-query CCDS DB by CCDS ID:73582.1Re-query CCDS DB by GeneID:57626See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73582.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000545028.2 ENSP00000439602.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545028.2Link to Ensembl Protein Viewer:ENSP00000439602.2Re-query CCDS DB by Nucleotide ID:ENST00000545028Re-query CCDS DB by Protein ID:ENSP00000439602
Original member Current member NCBI NM_001286725.2 NP_001273654.1 Accepted alive Link to Nucleotide Sequence:NM_001286725.2Link to Protein Sequence:NP_001273654.1Re-query CCDS DB by Nucleotide ID:NM_001286725Re-query CCDS DB by Protein ID:NP_001273654Link to BLAST:NP_001273654.1

Chromosomal Locations for CCDS 73582.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 69701702 69701761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69707625 69707796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69719369 69719581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69740394 69740556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69796738 69796962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69838976 69839162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69882283 69882495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69940040 69940236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 69961308 69961444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 70107203 70107699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2064 nt):
ATGTCAGGCTCTGGGCGAAAAGACTTCGATGTGAAGCACATTCTGCGACTCCGCTGGAAACTCTTCAGCC
ACCCGTCTCCTTCCACCGGCGGCCCGGCGGGGGGAGGCTGCCTGCAACAGGACGGCAGTGGCAGCTTTGA
GCACTGGGGACCCAGCCAGAGTCGCCTGCTCAAAAGCCAAGAGAGAAGCGGTGTGAGCACTTTCTGGAAG
AAGCCTTCCTCCTCTTCCTCTTCATCGTCCTCCCCGTCCTCTTCCTCCTCTTCCTTCAATCCGCTGAATG
GCACCCTGCTTCCAGTTGCCACGAGGCTGCAGCAAGGGGCTCCTGGGCAGGGCACTCAGCAGCCAGCCAG
GACTCTCTTCTACGTGGAGTCACTAGAGGAGGAGGTGGTGCCAGGCATGGACTTTCCTGGACCACACGAA
AAAGGGCTGGTTCTGCAAGAGCTCAAAGTGGAGCCAGACAACTCTAGCCAGGCAACAGGTGAAGGATGTG
GACACAGGCTTGTTCTGAGTTCAGTCTCCGACTATTTTGCGGCCATGTTTACAAGTGATGTTTGTGAAGC
CAAGCAAGAGGAGATCAAAATGGAAGGCATAGACCCCAATGCTCTCTGGGACCTTGTCCAATTTGCATAT
ACAGGCTGCTTGGAATTAAAAGAGGACACCATTGAGAACCTTCTTGCTGCAGCGTGCCTTCTTCAGCTTC
CACAGGTGGTGGAAGTGTGCTGCCACTTCCTCATGAAGCTTTTGCATCCATCTAACTGTTTAGGAATTCG
AGCCTTCGCAGATGCTCAAGGATGCATTGAGTTAATGAAGGTGGCCCACAGCTACACAATGGAAAACATA
ATGGAAGTTATCAGAAATCAAGAGTTTTTACTCCTTCCAGCTGAGGAGCTCCATAAACTACTGGCCAGTG
ATGATGTCAATGTTCCTGATGAAGAAACCATCTTCCATGCATTGATGATGTGGGTCAAGTATGACATGCA
GAGTAGATGCAATGACCTGAGCATGCTTCTTGCCTTTATAAGACTGCCACTGCTTCCACCACAGATATTG
GCTGACCTAGAAAATCATGCATTATTTAAGAATGATCTGGAATGTCAAAAGCTGATTCTAGAAGCAATGA
AATACCATCTATTGCCAGAAAGAAGAACTTTAATGCAAAGTCCGAGAACTAAACCCAGAAAATCTACAGT
CGGAACTTTGTATGCTGTAGGAGGAATGGATAACAACAAAGGAGCTACAACTATAGAGAAATATGATCTG
AGAACAAATCTGTGGATCCAGGCAGGGATGATGAATGGCAGAAGGCTGCAGTTTGGTGTGGCTGTTATTG
ATGACAAACTCTTTGTAATTGGAGGTCGAGATGGCTTAAAGACATTGAACACTGTTGAATGTTACAATCC
CAAAACCAAGACATGGACTGTCTTACCACCAATGTCAACACACAGACATGGTCTAGGTGTAACAGTACTT
GAAGGCCCTATTTATGCTGTGGGAGGCCATGATGGCTGGAGCTATCTGAATACAGTGGAAAGGTGGGATC
CACAGAGTCAACAATGGACATTTGTAGCCAGTATGTCAATTGCTCGGAGCACAGTTGGTGTAGCAGCATT
GAATGGCAAGTTGTATTCAGTTGGAGGTCGTGATGGAAGTTCCTGTTTGAGTTCAATGGAATATTATGAT
CCTCATACAAATAAGTGGAACATGTGTGCTCCCATGTGTAAGAGGAGAGGGGGTGTCGGAGTGGCCACAT
GTGACGGTTTTCTTTATGCAGTAGGAGGTCATGATGCTCCTGCTTCAAATCACTGTTCCCGGCTACTGGA
TTATGTAGAAAGATATGATCCCAAAACAGACACTTGGACCATGGTGGCTCCTTTGAGTATGCCCAGAGAT
GCTGTTGGGGTCTGTCTCCTTGGTGACAGATTATATGCTGTTGGTGGCTATGATGGACAGACATACCTCA
ACACTATGGAATCCTATGACCCACAAACTAATGAGTGGACACAGATGGCTTCCTTGAATATTGGGAGAGC
AGGTGCCTGTGTGGTAGTCATCAAGCAACCTTGA

Translation (687 aa):
MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGSFEHWGPSQSRLLKSQERSGVSTFWK
KPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQQGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHE
KGLVLQELKVEPDNSSQATGEGCGHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAY
TGCLELKEDTIENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMENI
MEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLAFIRLPLLPPQIL
ADLENHALFKNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTVGTLYAVGGMDNNKGATTIEKYDL
RTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGRDGLKTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVL
EGPIYAVGGHDGWSYLNTVERWDPQSQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYD
PHTNKWNMCAPMCKRRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRD
AVGVCLLGDRLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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