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Report for CCDS73415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73415.1 Public Homo sapiens 11 ZBTB44 24 110 108 CCDS HistoryNCBI Gene:29068Re-query CCDS DB by CCDS ID:73415.1Re-query CCDS DB by GeneID:29068See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530205.5 ENSP00000434177.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530205.5Link to Ensembl Protein Viewer:ENSP00000434177.1Re-query CCDS DB by Nucleotide ID:ENST00000530205Re-query CCDS DB by Protein ID:ENSP00000434177
Original member Current member NCBI NM_001301099.2 NP_001288028.1 Accepted alive Link to Nucleotide Sequence:NM_001301099.2Link to Protein Sequence:NP_001288028.1Re-query CCDS DB by Nucleotide ID:NM_001301099Re-query CCDS DB by Protein ID:NP_001288028Link to BLAST:NP_001288028.1
Original member Current member NCBI NM_001370223.1 NP_001357152.1 Accepted alive Link to Nucleotide Sequence:NM_001370223.1Link to Protein Sequence:NP_001357152.1Re-query CCDS DB by Nucleotide ID:NM_001370223Re-query CCDS DB by Protein ID:NP_001357152Link to BLAST:NP_001357152.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288028.1 474 Q8NCP5-2 474 100% 0 0
NP_001357152.1 474 Q8NCP5-2 474 100% 0 0

Chromosomal Locations for CCDS 73415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 130233309 130233382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130237010 130237093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130238444 130238607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130239812 130239896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130260856 130261873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGGTGTGAAAACATTTACTCATAGCTCCTCTTCCCACAGCCAGGAAATGCTTGGAAAGCTAAATATGC
TGCGAAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCACATAAGGT
GGTACTAGCAGCTTGCAGTGATTTCTTTCGCACCAAACTTGTAGGCCAAGCCGAGGATGAGAACAAGAAT
GTGTTGGATCTGCATCATGTTACAGTGACTGGCTTTATACCTCTTTTAGAATATGCTTACACAGCCACTC
TATCAATTAACACAGAAAATATTATTGATGTTCTAGCAGCAGCCAGCTATATGCAAATGTTCAGTGTTGC
CAGCACCTGCTCAGAGTTCATGAAATCAAGCATTTTATGGAATACACCCAACAGCCAACCTGAAAAGGGT
CTAGATGCTGGACAAGAAAATAATTCTAACTGCAATTTTACTTCTCGAGATGGGAGCATTTCTCCCGTGT
CCTCAGAGTGCAGTGTGGTAGAAAGAACCATTCCTGTCTGCCGAGAATCCCGGAGAAAGCGCAAAAGCTA
CATTGTTATGTCTCCTGAAAGTCCTGTAAAGTGTGGCACACAAACAAGCTCACCCCAGGTATTGAATTCT
TCAGCTTCCTACTCAGAAAATAGAAACCAACCAGTTGACTCTTCCTTAGCTTTTCCTTGGACTTTTCCTT
TTGGAATTGATCGAAGGATTCAGCCTGAGAAAGTTAAGCAAGCAGAAAATACCCGGACTTTAGAATTACC
TGGCCCATCTGAGACCGGTAGAAGAATGGCTGATTATGTGACTTGTGAGAGCACAAAAACTACCTTGCCT
TTAGGTACCGAAGAAGATGTCCGGGTCAAAGTAGAAAGATTAAGTGATGAGGAGGTCCATGAGGAAGTGT
CCCAGCCTGTCAGTGCATCTCAGAGTTCGCTGAGTGATCAGCAGACAGTTCCAGGAAGTGAACAAGTCCA
AGAGGACCTTCTGATTAGTCCACAGTCTTCCTCTATAGGCTCAGTAGATGAAGGCGTTTCTGAGGGCTTG
CCTACACTTCAAAGCACGTCTAGCACTAATGCTCCTCCGGATGATGATGATCGATTGGAAAATGTTCAGT
ATCCCTACCAACTCTACATTGCTCCTTCCACCAGCAGTACAGAGCGACCAAGTCCAAATGGTCCCGACAG
ACCTTTTCAGTGTCCAACCTGCGGGGTGCGATTCACCCGTATTCAGAACCTAAAGCAGCACATGCTCATC
CACTCAGGAATTAAACCATTTCAGTGTGACCGCTGTGGGAAAAAGTTCACCAGGGCTTACTCGCTAAAGA
TGCATCGCCTAAAGCATGAAGTACCACTCCAAAGGCAAGGAACCATGATTGACAACAGTCAAGCTGTGGA
TGAAATGACCAGGAACGGAGAATGA

Translation (474 aa):
MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKLVGQAEDENKN
VLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKG
LDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCGTQTSSPQVLNS
SASYSENRNQPVDSSLAFPWTFPFGIDRRIQPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLP
LGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGL
PTLQSTSSTNAPPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEVPLQRQGTMIDNSQAVDEMTRNGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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