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Report for CCDS73414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73414.1 Public Homo sapiens 11 ZBTB44 24 110 108 CCDS HistoryNCBI Gene:29068Re-query CCDS DB by CCDS ID:73414.1Re-query CCDS DB by GeneID:29068See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357899.9 ENSP00000350574.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357899.9Link to Ensembl Protein Viewer:ENSP00000350574.4Re-query CCDS DB by Nucleotide ID:ENST00000357899Re-query CCDS DB by Protein ID:ENSP00000350574
Original member Current member EBI ENST00000397753.5 ENSP00000380861.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397753.5Link to Ensembl Protein Viewer:ENSP00000380861.1Re-query CCDS DB by Nucleotide ID:ENST00000397753Re-query CCDS DB by Protein ID:ENSP00000380861
Original member Current member NCBI NM_001301098.2 NP_001288027.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001301098.2Link to Protein Sequence:NP_001288027.1Re-query CCDS DB by Nucleotide ID:NM_001301098Re-query CCDS DB by Protein ID:NP_001288027Link to BLAST:NP_001288027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288027.1 570 Q8NCP5-1 570 99.8246% 0 1

Chromosomal Locations for CCDS 73414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 130233356 130233382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130234156 130234273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130236793 130237093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130238444 130238607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130239812 130239896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 130260856 130261873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGGGTGTGAAAACATTTACTCATAGCTCCTCTTCCCACAGCCAGGAAATGCTTGGAAAGCTAAATATGC
TGCGAAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCACATAAGGT
GGTACTAGCAGCTTGCAGTGATTTCTTTCGCACCAAACTTGTAGGCCAAGCCGAGGATGAGAACAAGAAT
GTGTTGGATCTGCATCATGTTACAGTGACTGGCTTTATACCTCTTTTAGAATATGCTTACACAGCCACTC
TATCAATTAACACAGAAAATATTATTGATGTTCTAGCAGCAGCCAGCTATATGCAAATGTTCAGTGTTGC
CAGCACCTGCTCAGAGTTCATGAAATCAAGCATTTTATGGAATACACCCAACAGCCAACCTGAAAAGGGT
CTAGATGCTGGACAAGAAAATAATTCTAACTGCAATTTTACTTCTCGAGATGGGAGCATTTCTCCCGTGT
CCTCAGAGTGCAGTGTGGTAGAAAGAACCATTCCTGTCTGCCGAGAATCCCGGAGAAAGCGCAAAAGCTA
CATTGTTATGTCTCCTGAAAGTCCTGTAAAGTGTGGCACACAAACAAGCTCACCCCAGGTATTGAATTCT
TCAGCTTCCTACTCAGAAAATAGAAACCAACCAGTTGACTCTTCCTTAGCTTTTCCTTGGACTTTTCCTT
TTGGAATTGATCGAAGGATTCAGCCTGAGAAAGTTAAGCAAGCAGAAAATACCCGGACTTTAGAATTACC
TGGCCCATCTGAGACCGGTAGAAGAATGGCTGATTATGTGACTTGTGAGAGCACAAAAACTACCTTGCCT
TTAGGTACCGAAGAAGATGTCCGGGTCAAAGTAGAAAGATTAAGTGATGAGGAGGTCCATGAGGAAGTGT
CCCAGCCTGTCAGTGCATCTCAGAGTTCGCTGAGTGATCAGCAGACAGTTCCAGGAAGTGAACAAGTCCA
AGAGGACCTTCTGATTAGTCCACAGTCTTCCTCTATAGGCTCAGTAGATGAAGGCGTTTCTGAGGGCTTG
CCTACACTTCAAAGCACGTCTAGCACTAATGCTCCTCCGGATGATGATGATCGATTGGAAAATGTTCAGT
ATCCCTACCAACTCTACATTGCTCCTTCCACCAGCAGTACAGAGCGACCAAGTCCAAATGGTCCCGACAG
ACCTTTTCAGTGTCCAACCTGCGGGGTGCGATTCACCCGTATTCAGAACCTAAAGCAGCACATGCTCATC
CACTCAGGAATTAAACCATTTCAGTGTGACCGCTGTGGGAAAAAGTTCACCAGGGCTTACTCGCTAAAGA
TGCATCGCCTAAAGCATGAAGGTAAACGCTGTTTCCGGTGCCAGATATGTAGTGCCACTTTCACTTCCTT
CGGGGAATATAAACACCACATGAGGGTTTCCCGGCACATTATCCGCAAGCCTCGGATTTACGAGTGCAAA
ACATGTGGCGCCATGTTCACCAACTCTGGAAATTTAATCGTGCACCTGAGGAGTCTGAACCATGAAGCAT
CAGAGCTAGCAAACTACTTCCAGAGCAGTGATTTCCTAGTACCGGACTACTTAAACCAGGAACAAGAAGA
GACCCTTGTTCAATATGATCTTGGAGAACACGGTTTTGAAAGCAACTCCTCTGTTCAAATGCCTGTCATT
TCACAGTACCACTCCAAAGGCAAGGAACCATGA

Translation (570 aa):
MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKLVGQAEDENKN
VLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTCSEFMKSSILWNTPNSQPEKG
LDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRESRRKRKSYIVMSPESPVKCGTQTSSPQVLNS
SASYSENRNQPVDSSLAFPWTFPFGIDRRIQPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLP
LGTEEDVRVKVERLSDEEVHEEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGL
PTLQSTSSTNAPPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHIIRKPRIYECK
TCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEQEETLVQYDLGEHGFESNSSVQMPVI
SQYHSKGKEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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