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Report for CCDS73257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73257.1 Public Homo sapiens 11 SWAP70 24 110 108 CCDS HistoryNCBI Gene:23075Re-query CCDS DB by CCDS ID:73257.1Re-query CCDS DB by GeneID:23075See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447399.6 ENSP00000399056.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447399.6Link to Ensembl Protein Viewer:ENSP00000399056.2Re-query CCDS DB by Nucleotide ID:ENST00000447399Re-query CCDS DB by Protein ID:ENSP00000399056
Original member Current member NCBI NM_001297714.2 NP_001284643.1 Accepted alive Link to Nucleotide Sequence:NM_001297714.2Link to Protein Sequence:NP_001284643.1Re-query CCDS DB by Nucleotide ID:NM_001297714Re-query CCDS DB by Protein ID:NP_001284643Link to BLAST:NP_001284643.1

Chromosomal Locations for CCDS 73257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 9664180 9664278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9694146 9694286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9724658 9724885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9728053 9728199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9729343 9729451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9732529 9732710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9738213 9738320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9740181 9740347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9747858 9748056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9749087 9749183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9749864 9749970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGGGGAGCTTGAAGGAGGAGCTGCTCAAAGCCATCTGGCACGCCTTCACCGCACTCGACCAGGACCACA
GCGGCAAGGTCTCCAAGTCCCAGCTCAAGGTCCTTTCCCATAACCTGTGCACGGTGCTGAAGGTTCCTCA
TGACCCAGTTGCCCTTGAAGAGCACTTCAGGGATGATGATGAGGGTCCAGTGTCCAACCAGGGCTACATG
CCTTATTTAAACAGGTTCATTTTGGAAAAGATTGAATACCTGCTTAAGAAGCTTACAGAAGCTATGGGAG
GAGGTTGGCAGCAAGAACAATTTGAACATTATAAAATCAACTTTGATGACAGTAAAAATGGCCTTTCTGC
ATGGGAACTTATTGAGCTTATTGGAAATGGACAGTTTAGCAAAGGCATGGACCGGCAGACTGTGTCTATG
GCAATTAATGAAGTCTTTAATGAACTTATATTAGATGTGTTAAAGCAGGGTTACATGATGAAAAAGGGCC
ACAGACGGAAAAACTGGACTGAAAGATGGTTTGTACTAAAACCCAACATAATTTCTTACTATGTGAGTGA
GGATCTGAAGGATAAGAAAGGAGACATTCTCTTGGATGAAAATTGCTGTGTAGAGTCCTTGCCTGACAAA
GATGGAAAGAAATGCCTTTTTCTCGTAAAATGTTTTGATAAGACTTTTGAAATCAGTGCTTCAGATAAGA
AGAAGAAACAGGAGTGGATTCAAGCCATTCATTCTACTATTCATCTGTTGAAGCTGGGCAGCCCTCCACC
ACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCTGAACAAGAGGAACTGGAG
CGACAAATGAAGGAACTCCAGGCCGCCAACGAAAGCAAGCAGCAGGAGCTGGAGGCCGTGCGGAAGAAAC
TGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAGAAACGCCTTCAGACTCAAGTGGAACTTCAGGC
CAGGTTCAGCACAGAGCTGGAAAGAGAGAAGCTTATCAGACAGCAGATGGAAGAACAGGTTGCTCAAAAG
TCCTCTGAACTGGAACAGTATTTACAGCGAGTACGGGAGCTGGAAGACATGTACCTAAAGCTGCAGGAGG
CTCTTGAAGATGAGAGACAGGCCCGGCAAGATGAAGAGACAGTGCGGAAGCTTCAGGCCAGGTTGTTGGA
GGAAGAGTCTTCCAAGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGACAACC
GAGGCGGAGAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGAACAGGCCCTGCAGGAGGCCATGGAGC
AGCTGGAGCAGCTTGAGTTAGAACGGAAGCAAGCACTTGAGCAGTACGAGGAAGTTAAAAAGAAGCTGGA
GATGGCAACTAATAAGACCAAGAGCTGGAAGGACAAAGTGGCCCATCATGAAGGATTAATTCGACTGATA
GAACCAGGTTCAAAGAACCCTCACCTGATCACTAACTGGGGACCTGCAGCTTTCACTGAGGCAGAACTTG
AAGAGAGAGAGAAGAACTGGAAAGAGAAAAAGACCACGGAGTGA

Translation (527 aa):
MGSLKEELLKAIWHAFTALDQDHSGKVSKSQLKVLSHNLCTVLKVPHDPVALEEHFRDDDEGPVSNQGYM
PYLNRFILEKIEYLLKKLTEAMGGGWQQEQFEHYKINFDDSKNGLSAWELIELIGNGQFSKGMDRQTVSM
AINEVFNELILDVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK
DGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSPPPHKEARQRRKELRKKQLAEQEELE
RQMKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQARFSTELEREKLIRQQMEEQVAQK
SSELEQYLQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAIQTT
EAEKQELENQRVLKEQALQEAMEQLEQLELERKQALEQYEEVKKKLEMATNKTKSWKDKVAHHEGLIRLI
EPGSKNPHLITNWGPAAFTEAELEEREKNWKEKKTTE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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