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Report for CCDS73088.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73088.1 Public Homo sapiens 10 ZNF33A 24 110 108 CCDS HistoryNCBI Gene:7581Re-query CCDS DB by CCDS ID:73088.1Re-query CCDS DB by GeneID:7581See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73088.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307441.13 ENSP00000304268.10 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307441.13Link to Ensembl Protein Viewer:ENSP00000304268.10Re-query CCDS DB by Nucleotide ID:ENST00000307441Re-query CCDS DB by Protein ID:ENSP00000304268
Original member Current member NCBI NM_001278173.1 NP_001265102.1 Accepted alive Link to Nucleotide Sequence:NM_001278173.1Link to Protein Sequence:NP_001265102.1Re-query CCDS DB by Nucleotide ID:NM_001278173Re-query CCDS DB by Protein ID:NP_001265102Link to BLAST:NP_001265102.1

Chromosomal Locations for CCDS 73088.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 38015983 38016045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38016871 38017015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38017291 38017386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38054375 38056560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2490 nt):
ATGTGCCCTAGAGGATATCCAGAACAATCCAATTGGATGTCTTCTCCGCTGTACTCCACAGAGGTAGAAC
AGAAGTCCCAGGAGTCAGTATCATTTAAAGATGTGACTGTGGGCTTCACCCAGGAGGAGTGGCAGCACCT
GGACCCTAGTCAGAGGGCTCTGTATAGAGATGTGATGCTGGAGAACTACAGCAACCTTGTCTCAGTGGGG
TATTGTGTTCACAAACCAGAGGTGATCTTCAGGCTGCAACAAGGAGAAGAGCCATGGAAACAGGAGGAAG
AATTCCCAAGCCAAAGCTTTCCAGAAGTCTGGACAGCTGATCACCTGAAAGAGAGGAGCCAAGAAAACCA
ATCTAAACATTTGTGGGAAGTTGTATTCATCAATAATGAAATGCTGACTAAGGAACAAGGTGATGTAATA
GGAATACCATTTAATGTGGATGTAAGTTCTTTTCCTTCCAGAAAAATGTTCTGTCAGTGTGATTCATGTG
GAATGAGTTTCAACACTGTTTCAGAATTGGTTATCAGTAAGATAAACTATTTAGGAAAAAAGTCTGATGA
ATTTAATGCCTGTGGGAAATTGTTACTCAATATTAAGCATGATGAAACTCATACTCAAGAGAAAAATGAA
GTTTTGAAAAATAGGAACACACTGAGTCATCATGAGGAGACTTTGCAGCATGAGAAGATTCAAACTTTAG
AGCACAATTTTGAATACAGTATATGTCAGGAAACCCTCCTTGAAAAGGCAGTATTCAATACACAGAAGAG
AGAGAACGCAGAAGAGAATAACTGTGATTATAATGAATTTGGGAGAACTTTGTGTGATAGTTCATCCCTC
TTGTTCCATCAGATATCTCCGTCAAGGGACAATCACTATGAATTTAGTGATTGTGAGAAGTTCTTATGTG
TGAAGTCCACCCTTTCTAAACCTCATGGGGTATCTATGAAACACTATGATTGTGGTGAAAGTGGGAATAA
TTTCAGGAGGAAATTGTGTCTGTCACACCTTCAGAAAGGTGATAAAGGAGAGAAACACTTTGAATGTAAT
GAATGTGGGAAAGCTTTCTGGGAGAAGTCACATCTCACTCGACATCAGAGGGTGCACACAGGACAGAAAC
CCTTTCAATGTAATGAATGTGAAAAAGCTTTCTGGGATAAGTCAAACCTCACTAAACATCAAAGATCACA
CACAGGGGAGAAACCTTTTGAATGCAATGAATGTGGGAAAGCCTTTAGCCATAAGTCAGCCCTCACATTA
CACCAGAGAACACATACAGGGGAGAAACCCTATCAATGTAATGCGTGTGGGAAAACTTTTTGCCAGAAAT
CTGACCTCACTAAACATCAGAGAACACACACAGGGCTGAAACCCTATGAATGTTATGAATGTGGAAAATC
CTTCCGTGTGACTTCGCACCTTAAAGTACACCAGAGAACTCACACAGGTGAGAAACCTTTTGAATGTCTT
GAGTGTGGGAAATCCTTTAGTGAAAAGTCAAATCTTACACAGCATCAGAGAATTCACATAGGAGATAAAT
CTTATGAATGTAATGCATGTGGGAAAACTTTCTACCACAAGTCATTACTCACCAGGCATCAGATAATTCA
TACAGGGTGGAAACCTTATGAATGTTATGAATGTGGGAAAACCTTCTGCTTGAAGTCAGACCTCACAGTA
CATCAGAGAACACACACAGGGCAGAAACCCTTTGCATGTCCCGAATGTGGGAAATTCTTTAGCCATAAGT
CAACCCTCTCTCAACATTATAGAACACACACAGGGGAGAAACCCTACGAATGTCATGAATGTGGAAAAAT
CTTTTACAATAAATCATACCTAACTAAACATAATAGAACACATACAGGGGAGAAACCCTATGAATGTAAT
GAATGTGGAAAAGCCTTCTACCAGAAGTCACAACTCACTCAGCATCAGAGAATTCACATAGGGGAGAAAC
CCTATAAATGTAATGAGTGTGGAAAAGCTTTCTGCCATAAGTCAGCTCTAATTGTACATCAGAGAACCCA
TACACAAGAAAAGCCCTATAAATGTAATGAATGTGGAAAATCTTTCTGTGTAAAATCAGGACTTATTTTC
CATGAGAGAAAGCACACGGGGGAGAAACCCTATGAATGCAATGAATGTGGGAAATTCTTCAGGCACAAAT
CATCACTCACAGTACATCACAGGGCTCACACAGGAGAGAAATCTTGTCAATGTAATGAATGTGGAAAAAT
CTTTTACCGTAAATCGGAACTTGCTCAACATCAGAGATCACATACAGGGGAAAAGCCCTATGAATGTAAC
ACATGCAGGAAAACTTTCTCTCAAAAGTCAAATCTCATTGTACATCAGAGAAGACATATAGGAGAAAACC
TTATGAATGAAATGGATATTAGAAATTTCCAGCCACAAGTCAGCCTCCATAATGCCTCAGAGTATTCACA
CTGTGGAGAAAGCCCTGATGACATCCTGAATGTTCAGTAA

Translation (829 aa):
MCPRGYPEQSNWMSSPLYSTEVEQKSQESVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVG
YCVHKPEVIFRLQQGEEPWKQEEEFPSQSFPEVWTADHLKERSQENQSKHLWEVVFINNEMLTKEQGDVI
GIPFNVDVSSFPSRKMFCQCDSCGMSFNTVSELVISKINYLGKKSDEFNACGKLLLNIKHDETHTQEKNE
VLKNRNTLSHHEETLQHEKIQTLEHNFEYSICQETLLEKAVFNTQKRENAEENNCDYNEFGRTLCDSSSL
LFHQISPSRDNHYEFSDCEKFLCVKSTLSKPHGVSMKHYDCGESGNNFRRKLCLSHLQKGDKGEKHFECN
ECGKAFWEKSHLTRHQRVHTGQKPFQCNECEKAFWDKSNLTKHQRSHTGEKPFECNECGKAFSHKSALTL
HQRTHTGEKPYQCNACGKTFCQKSDLTKHQRTHTGLKPYECYECGKSFRVTSHLKVHQRTHTGEKPFECL
ECGKSFSEKSNLTQHQRIHIGDKSYECNACGKTFYHKSLLTRHQIIHTGWKPYECYECGKTFCLKSDLTV
HQRTHTGQKPFACPECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFYNKSYLTKHNRTHTGEKPYECN
ECGKAFYQKSQLTQHQRIHIGEKPYKCNECGKAFCHKSALIVHQRTHTQEKPYKCNECGKSFCVKSGLIF
HERKHTGEKPYECNECGKFFRHKSSLTVHHRAHTGEKSCQCNECGKIFYRKSELAQHQRSHTGEKPYECN
TCRKTFSQKSNLIVHQRRHIGENLMNEMDIRNFQPQVSLHNASEYSHCGESPDDILNVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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