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Report for CCDS72947.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72947.1 Public Homo sapiens 1 GLMP 24 110 108 CCDS HistoryNCBI Gene:112770Re-query CCDS DB by CCDS ID:72947.1Re-query CCDS DB by GeneID:112770See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 72947.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614643.4 ENSP00000480936.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614643.4Link to Ensembl Protein Viewer:ENSP00000480936.1Re-query CCDS DB by Nucleotide ID:ENST00000614643Re-query CCDS DB by Protein ID:ENSP00000480936
Original member Current member NCBI NM_001256609.2 NP_001243538.1 Accepted alive Link to Nucleotide Sequence:NM_001256609.2Link to Protein Sequence:NP_001243538.1Re-query CCDS DB by Nucleotide ID:NM_001256609Re-query CCDS DB by Protein ID:NP_001243538Link to BLAST:NP_001243538.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243538.1 325 Q8WWB7-2 325 100% 0 0

Chromosomal Locations for CCDS 72947.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156293044 156293209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156293320 156293576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156294018 156294236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156294365 156294565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156294759 156294893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGTGGCCACCAACACCCCCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCTATCCCCTGAGCCCG
ATGGGGGCCTGATGGTGCTCCCTAAGGACAGCATTCAGTTTTCTTCTGCCCTTGTTTTTACCAGGCTGCT
TGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC
TTGGCCGATTTCTCTTGGAACAACATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAG
GCCACCCCATGAACGACCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTTC
CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACACCTGTCAGCTAGAGGTGGCC
CTGATTGGAGCCTCTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCC
CTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGA
CCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGAAGCCG
GGGGGCCGAGAATCAGCCCTGCCCTGCCAAGCTTCCCCTCTTCATCCTGCCTTAGCATACTCTCTTCCCC
AGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC
TTCCACAGGCCCTGGCTATTGGGACCAACACTACCTCAGCTGGTCGATGCTCCTGGGTGTGGGCTTCCCT
CCAGTGGACGGCTTGTCCCCACTAGTCCTGGGCATCATGGCAGTGGCCCTGGGTGCCCCAGGGCTCATGC
TGCTAGGGGGCGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTACCAGTCCATAAATTAA

Translation (325 aa):
MVATNTPHSTLSVNWSLLLSPEPDGGLMVLPKDSIQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYS
LADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRPAQPPRLLHTADTCQLEVA
LIGASPRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEYAPAVFQLDQLLWGSLPSGFAQWRPVAYSQKP
GGRESALPCQASPLHPALAYSLPQSPIVRAFFGSQNNFCAFNLTFGASTGPGYWDQHYLSWSMLLGVGFP
PVDGLSPLVLGIMAVALGAPGLMLLGGGLVLLLHHKKYSEYQSIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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