NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS72881.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72881.1 Public Homo sapiens 1 NBPF12 24 110 108 CCDS HistoryNCBI Gene:149013Re-query CCDS DB by CCDS ID:72881.1Re-query CCDS DB by GeneID:149013See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72881.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617931.4 ENSP00000478609.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617931.4Link to Ensembl Protein Viewer:ENSP00000478609.1Re-query CCDS DB by Nucleotide ID:ENST00000617931Re-query CCDS DB by Protein ID:ENSP00000478609
Original member Current member EBI ENST00000698835.1 ENSP00000513971.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000698835.1Link to Ensembl Protein Viewer:ENSP00000513971.1Re-query CCDS DB by Nucleotide ID:ENST00000698835Re-query CCDS DB by Protein ID:ENSP00000513971
Original member Current member NCBI NM_001278141.3 NP_001265070.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001278141.3Link to Protein Sequence:NP_001265070.1Re-query CCDS DB by Nucleotide ID:NM_001278141Re-query CCDS DB by Protein ID:NP_001265070Link to BLAST:NP_001265070.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265070.1 1457 Q5TAG4 1457 100% 0 0

Chromosomal Locations for CCDS 72881.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 146960144 146960318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146962161 146962263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146963095 146963309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146964357 146964429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146964893 146965104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146966464 146966673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146968448 146968550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146969382 146969596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146970647 146970719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146971183 146971394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146972751 146972960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146974739 146974841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146975677 146975891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146976929 146977001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146977466 146977671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146978959 146979010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146982928 146983091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146984134 146984185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146984813 146984985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146985705 146985756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146986352 146986524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146987234 146987285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146987954 146988126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146988841 146988949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146989574 146989746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146990466 146990517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146991113 146991285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146991995 146992046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146992712 146992884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146993599 146993707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 146994332 146994575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4374 nt):
ATGGTGGTATCAGCCGGCCCTTGGTCCAGCGAGAAGGCAGAGATGAACATTCTAGAAATCAACGAGAAAT
TGCGCCCCCAGTTGGCAGAGAACAAACAGCAGTTCAGAAACCTCAAAGAGAGATGTTTTCTAACTCAACT
GGCCGGCTTCCTGGCCAACCGACAGAAGAAATACAAGTATGAAGAGTGTAAAGACCTCATAAAATTTATG
CTGAGGAATGAGCGACAGTTCAAGGAGGAGAAGCTTGCAGAGCAGCTGAAACAAGCTGAGGAGCTCAGGC
AATATAAAGTCCTGGTTCACTCTCAGGAACGAGAGCTGACCCAGTTAAGGGAGAAGTTACGGGAAGGGAG
AGATGCCTCCCGCTCATTGAATGAGCATCTCCAGGCCCTCCTCACTCCGGATGAGCCGGACAAGTCCCAG
GGGCAGGACCTCCAAGAACAGCTGGCTGAGGGGTGTAGACTGGCACAGCAACTTGTCCAAAAGCTCAGCC
CAGAAAATGATGAAGATGAGGATGAAGATGTTCAAGTTGAGGAGGATGAGAAAGTACTGGAATCATCTGC
CCCCAGGGAGGTGCAGAAGGCTGAAGAGAGCAAAGTCCCTGAGGACTCACTGGAGGAATGTGCCATCACT
TGTTCAAATAGCCACGGCCCTTGTGACTCCATCCAGCCTCACAAGAACATCAAAATCACATTTGAGGAAG
ACAAAGTCAACTCAACTGTGGTTGTAGACAGAAAATCCTCTCATGATGAATGTCAGGATGCTCTAAACAT
TCTCCCAGTCCCTGGCCCCACCTCTTCTGCCACAAACGTCAGCATGGTGGTATCAGCCGGCCCTTTGTCC
AGCGAGAAGGCAGAGATGAACATTCTAGAAATCAATGAGAAGTTGCGCCCCCAGCTGGCAGAGAAGAAAC
AGCAGTTCAGAAGCCTCAAAGAGAAATGTTTTGTAACTCAACTGGCCGGCTTCCTGGCCAAGCAGCAGAA
CAAATACAAATATGAAGAGTGCAAAGACCTCATAAAATCTATGCTGAGGAATGAGCTACAGTTCAAGGAG
GAGAAGCTTGCAGAGCAGCTGAAGCAAGCTGAGGAGCTCAGGCAATATAAAGTCCTGGTTCACTCTCAGG
AACGAGAGCTGACCCAGTTAAGGGAGAAGTTACGGGAAGGGAGAGATGCCTCCCGCTCATTGAATGAGCA
TCTCCAGGCCCTCCTCACTCCGGATGAGCCGGACAAGTCCCAGGGGCAGGACCTCCAAGAACAGCTGGCT
GAGGGGTGTAGACTGGCACAGCACCTTGTCCAAAAGCTCAGCCCAGAAAATGATGAAGATGAGGATGAAG
ATGTTCAAGTTGAGGAGGATGAGAAAGTGCTGGAATCATCTTCCCCCAGGGAGATGCAGAAGGCTGAAGA
AAGCAAAGTCCCTGAGGACTCACTGGAGGAATGTGCCATCACTTGTTCAAATAGCCACGGCCCTTGTGAC
TCCAACCAGCCTCACAAGAACATCAAAATCACATTTGAGGAAGACAAAGTCAACTCATCTCTGGTTGTAG
ACAGAGAATCCTCTCATGATGAATGTCAGGATGCTCTAAACATTCTCCCAGTCCCTGGCCCCACCTCTTC
TGCCACAAACGTCAGCATGGTGGTATCAGCCGGCCCTTTGTCCAGCGAGAAGGCAGAGATGAACATTCTA
GAAATCAATGAGAAGTTGCGCCCCCAGCTGGCAGAGAAGAAACAGCAGTTCAGAAGCCTCAAAGAGAAAT
GTTTTGTAACTCAAGTGGCCTGCTTCCTGGCCAAGCAGCAGAACAAATACAAATATGAAGAGTGCAAAGA
CCTCCTAAAATCTATGCTGAGGAATGAGCTACAGTTCAAGGAGGAGAAGCTTGCAGAGCAGCTGAAGCAA
GCTGAGGAGCTCAGGCAATATAAAGTCCTGGTTCACTCTCAGGAACGAGAGCTGACCCAGTTAAGGGAGA
AGTTACGGGAAGGGAGAGATGCCTCCCGCTCATTGAATGAGCATCTCCAGGCCCTCCTCACTCCGGATGA
GCCGGACAAGTCCCAGGGGCAGGACCTCCAAGAACAGCTGGCTGAGGGGTGTAGACTGGCACAACACCTT
GTCCAAAAGCTCAGCCCAGAAAATGATAACGATGACGATGAAGATGTTCAAGTTGAGGTGGCTGAGAAAG
TGCAGAAATCGTCTTCCCCCAGGGAGATGCAGAAGGCTGAAGAAAAGGAAGTCCCTGAGGACTCACTGGA
GGAGTGTGCCATCACTTGTTCAAATAGCCATGGCCCTTATGACTCCAACCAGCCACATAGGAAAACCAAA
ATCACATTTGAGGAAGACAAAGTCGACTCAACTCTCATTGGCTCATCCTCTCATGTTGAATGGGAGGATG
CTGTACACATTATCCCAGAAAATGAAAGTGATGATGAGGAAGAGGAAGAAAAAGGGCCAGTGTCTCCCAG
GAATCTGCAGGAGTCTGAAGAGGAGGAAGTCCCCCAGGAGTCCTGGGATGAAGGTTATTCGACTCTCTCA
ATTCCTCCTGAAAGGTTGGCCTCATACCAGTCTTACAGCAGCACATTTCACTCATTAGAGGAACAGCAAG
TCTGCATGGCTGTTGACATAGGCAGACATCGGTGGGATCAAGTGAAAAAGGAGGACCAAGAGGCAACAGG
TCCCAGGCTCAGCAGGGAGCTGCTGGCTGAGAAAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGT
TATTCAACTCCTTCAGTTTATCTTGGACTGACTGACTCATGCCAGCCCTACAGAAGTGCCTTTTACGTAT
TGGAGCAACAGCGTGTTGGCTTGGCTGTTGACATGGATGAAATTGAAAAGTACCAAGAAGTGGAAGAAGA
CCAAGACCCATCATGCCCCAGGCTCAGCAGGGAGCTGCTGGCTGAGAAAGAGCCTGAAGTCTTGCAGGAC
TCACTGGATAGATGTTATTCGACTCCTTCAGGTTATCTTGAACTGCCTGACTTAGGCCAGCCCTACAGAA
GTGCTGTTTACTCATTGGAGGAACAGTACCTTGGCTTGGCTCTTGACGTGGACAGAATTAAAAAGGACCA
AGAAGAGGAAGAAGACCAAGGCCCACCATGCCCCAGGCTCAGCAGGGAGCTGCTGGAGGTAGTAGAGCCT
GAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCCAGTTGTCTTGAACAGCCTGACTCCT
GCCAGCCCTACAGAAGTTCCTTTTATGCATTGGAGGAAAAACATGTTGGCTTTTCTCTTGACGTGGGAGA
AATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAGAAGAAAAGAAGAAGGGGAAGA
AAAGAAGGGGAAGAAGATCAAAACCCACCATGCCCCAGGCTCAGCAGGGAGCTGCTGGCTGAGAAAGAGC
CTGAAGTCTTGCAGGACTCACTGGATAGATGGTATTCGACTCCTTCAGTTTATCTTGGACTGACTGACCC
ATGCCAGCCCTACAGAAGTGCCTTTTACGTATTGGAGCAACAGCGTGTTGGCTTGGCTGTTGACATGGAT
GAAATTGAAAAGTACCAAGAAGTGGAAGAAGACCAAGACCCATCATGCCCCAGGCTCAGCAGGGAGCTGC
TGGCTGAGAAAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCGACTCCTTCAGGTTATCT
TGAACTGCCTGACTTAGGCCAGCCCTACAGAAGTGCTGTTTACTCATTGGAGGAACAGTACCTTGGCTTG
GCTCTTGACGTGGACAGAATTAAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCCCACCATGCCCCAGGC
TCAGCAGGGAGCTGCTGGAGGTAGTAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAAC
TCCTTCCAGTTGTCTTGAACAGCCTGACTCCTGCCAGCCCTACAGAAGTTCCTTTTATGCATTGGAGGAA
AAACATGTTGGCTTTTCTCTTGACGTGGGAGAAATTGAAAAGAAGGGGAAGGGGAAGAAAAGAAGGGGAA
GAAGATCAAAGAAGAAAAGAAGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAACCCACCATGCCCCAG
GCTCAACAGCGTGCTGATGGAAGTGGAAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCG
ACTCCATCAATGTACTTTGAACTACCTGACTCATTCCAGCACTACAGAAGTGTGTTTTACTCATTTGAGG
AACAGCACATCACCTTTGCCCTTGACATGGACAATAGCTTTTTTACTTTGACGGTGACAAGTCTCCACCT
GGTCTTCCAGATGGGAGTCATATTCCCACAATAA

Translation (1457 aa):
MVVSAGPWSSEKAEMNILEINEKLRPQLAENKQQFRNLKERCFLTQLAGFLANRQKKYKYEECKDLIKFM
LRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQ
GQDLQEQLAEGCRLAQQLVQKLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVPEDSLEECAIT
CSNSHGPCDSIQPHKNIKITFEEDKVNSTVVVDRKSSHDECQDALNILPVPGPTSSATNVSMVVSAGPLS
SEKAEMNILEINEKLRPQLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKYEECKDLIKSMLRNELQFKE
EKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLA
EGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSSPREMQKAEESKVPEDSLEECAITCSNSHGPCD
SNQPHKNIKITFEEDKVNSSLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNIL
EINEKLRPQLAEKKQQFRSLKEKCFVTQVACFLAKQQNKYKYEECKDLLKSMLRNELQFKEEKLAEQLKQ
AEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHL
VQKLSPENDNDDDEDVQVEVAEKVQKSSSPREMQKAEEKEVPEDSLEECAITCSNSHGPYDSNQPHRKTK
ITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLS
IPPERLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLAEKEPEVLQDSLDRC
YSTPSVYLGLTDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQD
SLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEP
EVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKKRRRGR
KEGEEDQNPPCPRLSRELLAEKEPEVLQDSLDRWYSTPSVYLGLTDPCQPYRSAFYVLEQQRVGLAVDMD
EIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGL
ALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEE
KHVGFSLDVGEIEKKGKGKKRRGRRSKKKRRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDRCYS
TPSMYFELPDSFQHYRSVFYSFEEQHITFALDMDNSFFTLTVTSLHLVFQMGVIFPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH