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Report for CCDS72832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72832.1 Public Homo sapiens 1 OLFM3 24 110 108 CCDS HistoryNCBI Gene:118427Re-query CCDS DB by CCDS ID:72832.1Re-query CCDS DB by GeneID:118427See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338858.9 ENSP00000345192.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338858.9Link to Ensembl Protein Viewer:ENSP00000345192.5Re-query CCDS DB by Nucleotide ID:ENST00000338858Re-query CCDS DB by Protein ID:ENSP00000345192
Original member Current member NCBI NM_001288821.2 NP_001275750.1 Accepted alive Link to Nucleotide Sequence:NM_001288821.2Link to Protein Sequence:NP_001275750.1Re-query CCDS DB by Nucleotide ID:NM_001288821Re-query CCDS DB by Protein ID:NP_001275750Link to BLAST:NP_001275750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275750.1 478 Q96PB7-1 478 100% 0 0

Chromosomal Locations for CCDS 72832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 101804238 101804915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 101806076 101806182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 101825026 101825245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 101830672 101830827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 101836879 101837025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 101846845 101846973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGAGTCCTCCACTGCTGAAGCTTGGCGCTGTGCTTAGTACCATGGCAATGATCTCAAACTGGATGTCCC
AAACTCTCCCATCCTTGGTGGGACTGAACACCACGAGGCTGTCGACTCCGGATACCTTAACTCAGATTAG
TCCTAAAGAAGGGTGGCAGGTGTACAGCTCAGCTCAGGATCCTGATGGGCGGTGCATTTGCACAGTTGTT
GCTCCAGAACAAAACCTGTGTTCCCGGGATGCCAAAAGCAGGCAACTTCGCCAACTACTGGAAAAGGTTC
AGAACATGTCCCAGTCTATTGAAGTCTTAAACTTGAGAACTCAGAGAGATTTCCAATATGTTTTAAAAAT
GGAAACCCAAATGAAAGGGCTGAAGGCAAAATTTCGGCAGATTGAAGATGATCGAAAGACACTTATGACC
AAGCATTTTCAGGAGTTGAAAGAGAAAATGGACGAGCTCCTGCCTTTGATCCCCGTGCTGGAACAGTACA
AAACAGATGCTAAGTTAATCACCCAGTTCAAGGAGGAAATAAGGAATCTGTCTGCTGTCCTCACTGGTAT
TCAGGAGGAAATTGGTGCCTATGACTACGAGGAACTACACCAAAGAGTGCTGAGCTTGGAAACAAGACTT
CGTGACTGCATGAAAAAGCTAACATGTGGCAAACTGATGAAAATCACAGGCCCAGTTACAGTCAAGACAT
CTGGAACCCGATTTGGTGCTTGGATGACAGACCCTTTAGCATCTGAGAAAAACAACAGAGTCTGGTACAT
GGACAGTTATACTAACAATAAAATTGTTCGTGAATACAAATCAATTGCAGACTTTGTCAGTGGGGCTGAA
TCAAGGACATACAACCTTCCTTTCAAGTGGGCAGGAACTAACCATGTTGTCTACAATGGCTCACTCTATT
TTAACAAGTATCAGAGTAATATCATCATCAAATACAGCTTTGATATGGGGAGAGTGCTTGCCCAACGAAG
CCTGGAGTATGCTGGTTTTCATAATGTTTACCCCTACACATGGGGTGGATTCTCTGACATCGACCTAATG
GCTGATGAAATCGGGCTGTGGGCTGTGTATGCAACTAACCAGAATGCAGGCAATATTGTCATCAGCCAAC
TTAACCAAGATACCTTGGAGGTGATGAAGAGCTGGAGCACTGGCTACCCCAAGAGAAGTGCAGGGGAATC
TTTCATGATCTGTGGGACACTGTATGTCACCAACTCCCACTTAACTGGAGCCAAGGTGTATTATTCCTAT
TCCACCAAAACCTCCACATATGAGTACACAGACATTCCCTTCCATAACCAATACTTTCACATATCCATGC
TTGACTACAATGCAAGAGATCGAGCTCTCTATGCCTGGAACAATGGCCACCAGGTGCTGTTCAATGTCAC
CCTTTTCCATATCATCAAGACAGAGGATGACACATAG

Translation (478 aa):
MSPPLLKLGAVLSTMAMISNWMSQTLPSLVGLNTTRLSTPDTLTQISPKEGWQVYSSAQDPDGRCICTVV
APEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT
KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQRVLSLETRL
RDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAE
SRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLM
ADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSY
STKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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