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Report for CCDS72752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72752.1 Public Homo sapiens 1 BSDC1 24 110 108 CCDS HistoryNCBI Gene:55108Re-query CCDS DB by CCDS ID:72752.1Re-query CCDS DB by GeneID:55108See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72752.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341071.11 ENSP00000344816.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341071.11Link to Ensembl Protein Viewer:ENSP00000344816.7Re-query CCDS DB by Nucleotide ID:ENST00000341071Re-query CCDS DB by Protein ID:ENSP00000344816
Original member Current member NCBI NM_001300958.2 NP_001287887.1 Accepted alive Link to Nucleotide Sequence:NM_001300958.2Link to Protein Sequence:NP_001287887.1Re-query CCDS DB by Nucleotide ID:NM_001300958Re-query CCDS DB by Protein ID:NP_001287887Link to BLAST:NP_001287887.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287887.1 474 Q9NW68-3 474 100% 0 0

Chromosomal Locations for CCDS 72752.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32368333 32368550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32376262 32376741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32377970 32378048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32378215 32378283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32378724 32378839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32381214 32381268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32383830 32384048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32386779 32386895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32394080 32394140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32394404 32394414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGCGGAAGGGGAGGACGTGGGATGGTGGCGGAGCTGGCTGCAGCAGAGCTACCAAGCAGTCAAAGAGA
AGTCCTCTGAAGCCTTGGAGTTTATGAAGCGGGACCTGACGGAGTTTACCCAGGTGGTGCAGCATGACAC
GGCCTGTACCATCGCAGCCACGGCCAGCGTGGTCAAGGAGAAGCTGGCTATTGCAGCCTGTTCCCGGGGC
GCTTGCTTCCTCTGCCCGTTCTCTATACAGACGGAAGGCTCCTCAGGAGCAACAGAGAAGATGAAGAAAG
GGTTATCTGACTTCCTAGGGGTGATCTCAGACACCTTTGCCCCTTCGCCAGACAAAACCATCGACTGCGA
TGTCATCACCCTGATGGGCACACCGTCTGGCACAGCTGAGCCCTATGATGGCACCAAGGCTCGCCTCTAT
AGCCTGCAGTCGGACCCAGCAACCTACTGTAATGAACCAGATGGGCCCCCGGAATTGTTTGACGCCTGGC
TTTCCCAGTTCTGCTTGGAGGAGAAGAAGGGGGAGATCTCAGAGCTCCTTGTAGGCAGCCCCTCCATCCG
GGCCCTCTACACCAAGATGGTTCCAGCAGCTGTTTCCCATTCAGAATTCTGGCATCGGTATTTCTATAAA
GTCCATCAGTTAGAGCAGGAGCAGGCCCGGAGGGACGCCCTGAAGCAGCGGGCGGAACAGAGCATCTCTG
AAGAGCCCGGCTGGGAGGAGGAGGAAGAGGAGCTCATGGGCATTTCACCCATATCTCCAAAAGAGGCAAA
GGTTCCTGTGGCCAAAATTTCTACATTCCCTGAAGGAGAACCTGGCCCCCAGAGCCCCTGTGAAGAGAAT
CTGGTGACTTCAGTTGAGCCCCCAGCAGAGGTGACTCCATCAGAGAGCAGTGAGAGCATCTCCCTCGTGA
CACAGATCGCCAACCCGGCCACTGCACCTGAGGCACGAGTGCTACCCAAGGACCTGTCCCAAAAGCTGCT
AGAGGCATCCTTGGAGGAACAGGGCCTGGCTGTGGATGTGGGTGAGACTGGACCCTCACCCCCTATTCAC
TCCAAGCCCCTAACGCCTGCTGGCCACACCGGCGGCCCAGAGCCCAGGCCTCCAGCCAGAGTAGAGACTC
TGAGGGAGGAGGCGCCCACAGACTTACGGGTGTTTGAGCTGAACTCGGATAGTGGGAAGTCTACACCCTC
CAACAATGGAAAGAAAGGCTCAAGCACGGACATCAGTGAGGACTGGGAGAAAGACTTTGACTTGGACATG
ACTGAAGAGGAGGTGCAGATGGCACTTTCCAAAGTGGATGCCTCCGGGGAGGTGAGTGGGCCTGGTGGGT
CAGAGGGAAGCGAGCCTAATGGTCCTGGGTGTGAGAGCTCTCCCCAGCCAGCCCAGCTGTCCCCTCAGGA
GGGTCCCTGCTCCTGTCTGAGGTGA

Translation (474 aa):
MAEGEDVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKLAIAACSRG
ACFLCPFSIQTEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMGTPSGTAEPYDGTKARLY
SLQSDPATYCNEPDGPPELFDAWLSQFCLEEKKGEISELLVGSPSIRALYTKMVPAAVSHSEFWHRYFYK
VHQLEQEQARRDALKQRAEQSISEEPGWEEEEEELMGISPISPKEAKVPVAKISTFPEGEPGPQSPCEEN
LVTSVEPPAEVTPSESSESISLVTQIANPATAPEARVLPKDLSQKLLEASLEEQGLAVDVGETGPSPPIH
SKPLTPAGHTGGPEPRPPARVETLREEAPTDLRVFELNSDSGKSTPSNNGKKGSSTDISEDWEKDFDLDM
TEEEVQMALSKVDASGEVSGPGGSEGSEPNGPGCESSPQPAQLSPQEGPCSCLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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