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Report for CCDS6986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6986.1 Public Homo sapiens 9 OLFM1 24 110 108 CCDS HistoryNCBI Gene:10439Re-query CCDS DB by CCDS ID:6986.1Re-query CCDS DB by GeneID:10439See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6986.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252854.8 ENSP00000252854.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000252854.8Link to Ensembl Protein Viewer:ENSP00000252854.4Re-query CCDS DB by Nucleotide ID:ENST00000252854Re-query CCDS DB by Protein ID:ENSP00000252854
Original member Current member NCBI NM_014279.5 NP_055094.1 Accepted alive Link to Nucleotide Sequence:NM_014279.5Link to Protein Sequence:NP_055094.1Re-query CCDS DB by Nucleotide ID:NM_014279Re-query CCDS DB by Protein ID:NP_055094Link to BLAST:NP_055094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055094.1 467 Q99784-3 467 100% 0 0

Chromosomal Locations for CCDS 6986.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 135075707 135075802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135090195 135090344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135095864 135096019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135098286 135098505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135106749 135106855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135119504 135120178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGCCAGGTCGTTGGAGGTGGCAGCGAGACATGCACCCGGCCCGGAAGCTCCTCAGCCTCCTCTTCCTCA
TCCTGATGGGCACTGAACTCACTCAAGTGCTGCCCACCAACCCTGAGGAGAGCTGGCAGGTGTACAGCTC
TGCCCAGGACAGCGAGGGCAGGTGTATCTGCACAGTGGTCGCTCCACAGCAGACCATGTGTTCACGGGAT
GCCCGCACAAAACAGCTGAGGCAGCTACTGGAGAAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTGG
ACAGGCGGACCCAGAGAGACTTGCAGTACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCCAA
GTTCAAACAGGTGGAGGAGAGTCATAAGCAACACCTGGCCAGGCAGTTTAAGGCGATAAAAGCGAAAATG
GATGAACTTAGGCCTTTGATACCTGTGTTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTA
AAGAGGAGGTCCAGAATCTGACGTCAGTGCTTAACGAGCTGCAAGAGGAAATTGGCGCCTATGACTACGA
TGAACTTCAGAGCAGAGTGTCCAATCTTGAAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGGG
AAGTTGACGGGCATCAGTGACCCCGTGACTGTCAAGACCTCCGGCTCGAGGTTCGGATCCTGGATGACAG
ACCCTCTCGCCCCTGAAGGCGATAACCGGGTGTGGTACATGGACGGCTATCACAACAACCGCTTCGTACG
TGAGTACAAGTCCATGGTTGACTTCATGAACACGGACAATTTCACCTCCCACCGTCTCCCCCACCCCTGG
TCGGGCACGGGGCAGGTGGTCTACAACGGTTCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCA
GGTTTGACCTGAAGACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTA
CCACTACGCCTGGGGTGGCCACTCGGACATCGACCTCATGGTGGACGAGAGCGGGCTGTGGGCCGTGTAC
GCCACCAACCAGAACGCTGGCAACATCGTGGTCAGTAGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGA
CCTGGAACACGAGCTACCCCAAGCGCAGCGCCGGGGAGGCCTTCATCATCTGCGGCACGCTGTACGTCAC
CAACGGCTACTCAGGGGGTACCAAGGTCCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATC
GACATCCCATTCCAGAACAAATACTCCCACATCTCCATGCTGGACTACAACCCCAAGGACCGGGCCCTGT
ATGCCTGGAACAACGGCCACCAGATCCTCTACAACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGTT
GTAG

Translation (467 aa):
MPGRWRWQRDMHPARKLLSLLFLILMGTELTQVLPTNPEESWQVYSSAQDSEGRCICTVVAPQQTMCSRD
ARTKQLRQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLESKFKQVEESHKQHLARQFKAIKAKM
DELRPLIPVLEEYKADAKLVLQFKEEVQNLTSVLNELQEEIGAYDYDELQSRVSNLEERLRACMQKLACG
KLTGISDPVTVKTSGSRFGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHRLPHPW
SGTGQVVYNGSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDESGLWAVY
ATNQNAGNIVVSRLDPVSLQTLQTWNTSYPKRSAGEAFIICGTLYVTNGYSGGTKVHYAYQTNASTYEYI
DIPFQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRSDEL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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