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Report for CCDS6981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6981.1 Public Homo sapiens 9 WDR5 24 110 108 CCDS HistoryNCBI Gene:11091Re-query CCDS DB by CCDS ID:6981.1Re-query CCDS DB by GeneID:11091See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 6981.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358625.4 ENSP00000351446.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358625.4Link to Ensembl Protein Viewer:ENSP00000351446.3Re-query CCDS DB by Nucleotide ID:ENST00000358625Re-query CCDS DB by Protein ID:ENSP00000351446
Original member Current member NCBI NM_001384409.1 NP_001371338.1 Accepted alive Link to Nucleotide Sequence:NM_001384409.1Link to Protein Sequence:NP_001371338.1Re-query CCDS DB by Nucleotide ID:NM_001384409Re-query CCDS DB by Protein ID:NP_001371338Link to BLAST:NP_001371338.1
Original member Current member NCBI NM_001384410.1 NP_001371339.1 Accepted alive Link to Nucleotide Sequence:NM_001384410.1Link to Protein Sequence:NP_001371339.1Re-query CCDS DB by Nucleotide ID:NM_001384410Re-query CCDS DB by Protein ID:NP_001371339Link to BLAST:NP_001371339.1
Original member Current member NCBI NM_001384411.1 NP_001371340.1 Accepted alive Link to Nucleotide Sequence:NM_001384411.1Link to Protein Sequence:NP_001371340.1Re-query CCDS DB by Nucleotide ID:NM_001384411Re-query CCDS DB by Protein ID:NP_001371340Link to BLAST:NP_001371340.1
Original member Current member NCBI NM_001384412.1 NP_001371341.1 Accepted alive Link to Nucleotide Sequence:NM_001384412.1Link to Protein Sequence:NP_001371341.1Re-query CCDS DB by Nucleotide ID:NM_001384412Re-query CCDS DB by Protein ID:NP_001371341Link to BLAST:NP_001371341.1
Original member Current member NCBI NM_001384413.1 NP_001371342.1 Accepted alive Link to Nucleotide Sequence:NM_001384413.1Link to Protein Sequence:NP_001371342.1Re-query CCDS DB by Nucleotide ID:NM_001384413Re-query CCDS DB by Protein ID:NP_001371342Link to BLAST:NP_001371342.1
Original member Current member NCBI NM_001384414.1 NP_001371343.1 Accepted alive Link to Nucleotide Sequence:NM_001384414.1Link to Protein Sequence:NP_001371343.1Re-query CCDS DB by Nucleotide ID:NM_001384414Re-query CCDS DB by Protein ID:NP_001371343Link to BLAST:NP_001371343.1
Original member Current member NCBI NM_001384415.1 NP_001371344.1 Accepted alive Link to Nucleotide Sequence:NM_001384415.1Link to Protein Sequence:NP_001371344.1Re-query CCDS DB by Nucleotide ID:NM_001384415Re-query CCDS DB by Protein ID:NP_001371344Link to BLAST:NP_001371344.1
Original member Current member NCBI NM_017588.3 NP_060058.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017588.3Link to Protein Sequence:NP_060058.1Re-query CCDS DB by Nucleotide ID:NM_017588Re-query CCDS DB by Protein ID:NP_060058Link to BLAST:NP_060058.1
Original member Current member NCBI NM_052821.4 NP_438172.1 Accepted alive Link to Nucleotide Sequence:NM_052821.4Link to Protein Sequence:NP_438172.1Re-query CCDS DB by Nucleotide ID:NM_052821Re-query CCDS DB by Protein ID:NP_438172Link to BLAST:NP_438172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371338.1 334 P61964 334 100% 0 0
NP_001371339.1 334 P61964 334 100% 0 0
NP_001371340.1 334 P61964 334 100% 0 0
NP_001371341.1 334 P61964 334 100% 0 0
NP_001371342.1 334 P61964 334 100% 0 0
NP_001371343.1 334 P61964 334 100% 0 0
NP_001371344.1 334 P61964 334 100% 0 0
NP_060058.1 334 P61964 334 100% 0 0
NP_438172.1 334 P61964 334 100% 0 0

Chromosomal Locations for CCDS 6981.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 134139878 134139958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134140703 134140811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134141510 134141583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134141949 134142038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134142333 134142422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134142636 134142719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134148288 134148343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134151983 134152029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134154466 134154541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134155340 134155373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134155693 134155767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134156506 134156593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134157893 134157993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGGCGACGGAGGAGAAGAAGCCCGAGACCGAGGCCGCCAGAGCACAGCCAACCCCTTCGTCATCCGCCA
CTCAGAGCAAGCCTACACCTGTGAAGCCAAACTATGCTCTAAAGTTCACCCTTGCTGGCCACACCAAAGC
AGTGTCCTCCGTGAAATTCAGCCCGAATGGAGAGTGGCTGGCAAGTTCATCTGCTGATAAACTTATTAAA
ATTTGGGGCGCGTATGATGGGAAATTTGAGAAAACCATATCTGGTCACAAGCTGGGAATATCCGATGTAG
CCTGGTCGTCAGATTCTAACCTTCTTGTTTCTGCCTCAGATGACAAAACCTTGAAGATATGGGACGTGAG
CTCGGGCAAGTGTCTGAAAACCCTGAAGGGACACAGTAATTATGTCTTTTGCTGCAACTTCAATCCCCAG
TCCAACCTTATTGTCTCAGGATCCTTTGACGAAAGCGTGAGGATATGGGATGTGAAAACAGGGAAGTGCC
TCAAGACTTTGCCAGCTCACTCGGATCCAGTCTCGGCCGTTCATTTTAATCGTGATGGATCCTTGATAGT
TTCAAGTAGCTATGATGGTCTCTGTCGCATCTGGGACACCGCCTCAGGCCAGTGCCTGAAGACGCTCATC
GATGACGACAACCCCCCCGTGTCTTTTGTGAAGTTCTCCCCGAACGGCAAATACATCCTGGCCGCCACGC
TGGACAACACTCTGAAGCTCTGGGACTACAGCAAGGGGAAGTGCCTGAAGACGTACACTGGCCACAAGAA
TGAGAAATACTGCATATTTGCCAATTTCTCTGTTACTGGTGGGAAGTGGATTGTGTCTGGCTCAGAGGAT
AACCTTGTTTACATCTGGAACCTTCAGACGAAAGAGATTGTACAGAAACTACAAGGCCACACAGATGTCG
TGATCTCAACAGCTTGTCACCCAACAGAAAACATCATCGCCTCTGCTGCGCTAGAAAATGACAAAACAAT
TAAACTGTGGAAGAGTGACTGCTAA

Translation (334 aa):
MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK
IWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ
SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI
DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED
NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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