NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS69682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69682.1 Public Homo sapiens 9 NTMT1 24 110 108 CCDS HistoryNCBI Gene:28989Re-query CCDS DB by CCDS ID:69682.1Re-query CCDS DB by GeneID:28989See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69682.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372481.7 ENSP00000361559.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372481.7Link to Ensembl Protein Viewer:ENSP00000361559.3Re-query CCDS DB by Nucleotide ID:ENST00000372481Re-query CCDS DB by Protein ID:ENSP00000361559
Original member Current member NCBI NM_001286800.2 NP_001273729.1 Accepted alive Link to Nucleotide Sequence:NM_001286800.2Link to Protein Sequence:NP_001273729.1Re-query CCDS DB by Nucleotide ID:NM_001286800Re-query CCDS DB by Protein ID:NP_001273729Link to BLAST:NP_001273729.1
Original member Current member NCBI NM_001286801.2 NP_001273730.1 Accepted alive Link to Nucleotide Sequence:NM_001286801.2Link to Protein Sequence:NP_001273730.1Re-query CCDS DB by Nucleotide ID:NM_001286801Re-query CCDS DB by Protein ID:NP_001273730Link to BLAST:NP_001273730.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273729.1 145 Q9BV86-2 145 100% 0 0
NP_001273730.1 145 Q9BV86-2 145 100% 0 0

Chromosomal Locations for CCDS 69682.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 129632704 129632865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129634054 129634221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129635208 129635315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGACGAGCGAGGTGATAGAAGACGAGAAGCAATTCTATTCCAAGGCCAAGACCTACTGGAAACAAATCC
CACCCACGGTGGACGGCATGCTTGGGGGGTATGGCCACATCTCCAGCATCGACATCAACAGCTCCCGGAA
GTTTCTGCAGAGGTTTTTGAGGGAAGGCCCGAACAAGACAGGAACGTCCTGTGCCCTGGACTGTGGAGCT
GGCATTGGGAGGATCACCAAGCGGCTGCTCCTGCCGCTGTTCAGAGAGGTGGATATGGTCGACATAACGG
AGGACTTCCTGGTTCAAGCCAAGACCTACCTGGGGGAGGAGGGCAAGAGGGCCACCTCACCGATCAGCAC
CTGGCCGAGTTCCTGCGGCGCTGCAAGGGCAGCCTCCGCCCCAACGGCATCATCGTCATCAAAGACAACA
TGGCCCAGGAGGGCGTGA

Translation (145 aa):
MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGA
GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRATSPISTWPSSCGAARAASAPTASSSSKTT
WPRRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH