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Report for CCDS69509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69509.1 Public Homo sapiens 8 RMDN1 24 110 108 CCDS HistoryNCBI Gene:51115Re-query CCDS DB by CCDS ID:69509.1Re-query CCDS DB by GeneID:51115See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69509.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000519966.5 ENSP00000428661.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519966.5Link to Ensembl Protein Viewer:ENSP00000428661.1Re-query CCDS DB by Nucleotide ID:ENST00000519966Re-query CCDS DB by Protein ID:ENSP00000428661
Original member Current member NCBI NM_001286707.2 NP_001273636.1 Accepted alive Link to Nucleotide Sequence:NM_001286707.2Link to Protein Sequence:NP_001273636.1Re-query CCDS DB by Nucleotide ID:NM_001286707Re-query CCDS DB by Protein ID:NP_001273636Link to BLAST:NP_001273636.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273636.1 271 Q96DB5-3 271 100% 0 0

Chromosomal Locations for CCDS 69509.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 86474308 86474358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86474820 86474914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86477294 86477324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86478923 86479010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86480277 86480332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86486484 86486643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86488552 86488639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86506995 86507112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 86508492 86508620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGCGCTGGCTGCTCGACTGTGGCGCCTTCTGCCTTTCCGACGTGGAGCCGCCCCGGGGTCTCGTCTCC
CTGCGGGGACTTCGGGCAGCCGCGGGCATTGCGGCCCCTGTCGATTCCGCGGCTTCGAGGTAATGGGAAA
CCCAGGAACTTTCAAAAGAGGCCTTTTACTCTCAGCTTTGTCGTATTTGGGTTTTGAAACTTACCAGGTT
ATCTCTCAGGCTGCTGTGGTTCATGCCACAGCCAAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGT
ATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTGCTAACCCAATACAAGGAAAGTGAAGATGCAGAGTT
ACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTCAGAAGAGGAGAAAAAG
CTATTGGTGTATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAAAAAATGAATCAAGTTTTGCATCTC
ATAAGAAAGCAATTGAACTGAACCCTAAAGATGCTACTTCAATTCACCTTATGGGTATTTGGTGCTATAC
ATTTGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAAATGCTGTTTGCAACTCCTCCTAGTTCCACC
TATGAGAAGGCCTTAGGCTACTTTCACAGGGCAGAACAAGGAAAGACATACTTGAAACTACACAACAAAA
AGCTTGCTGCTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCACACACAGAGGAGGATAAACAGATACA
GACAGAAGCTGCTCAGTTGCTTACAAGTTTCAGTGAGAAGAATTGA

Translation (271 aa):
MALAARLWRLLPFRRGAAPGSRLPAGTSGSRGHCGPCRFRGFEVMGNPGTFKRGLLLSALSYLGFETYQV
ISQAAVVHATAKVEEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVAQLSRTSEEEKK
LLVYEALEYAKRALEKNESSFASHKKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSST
YEKALGYFHRAEQGKTYLKLHNKKLAAFWLMKAKDYPAHTEEDKQIQTEAAQLLTSFSEKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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